dev-lang / R

Language and environment for statistical computing and graphics

Official package sites : http://www.r-project.org/ ·

R is GNU S, a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. The R distribution contains functionality for a large number of statistical procedures such as: linear and generalized linear models, nonlinear regression models, time series analysis, classical parametric and nonparametric tests, clustering, smoothing and graphical data representations. Additional modules ("add-on packages") are available for a variety of specific purposes but are not distributed with this package.

v4.0.2 :: 0 :: gentoo

Modified
License
|| ( GPL-2 GPL-3 ) LGPL-2.1
Keywords
~amd64 ~amd64-linux ~arm64 ~hppa ~ia64 ~sparc ~x64-macos ~x86 ~x86-linux
USE flags
X cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs test tiff tk

v3.6.3-r1 :: 0 :: gentoo

Modified
License
|| ( GPL-2 GPL-3 ) LGPL-2.1
Keywords
~amd64 ~amd64-linux ~arm64 ~hppa ~ia64 ~sparc ~x64-macos ~x86 ~x86-linux
USE flags
X cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs test tiff tk

v3.4.1 :: 0 :: gentoo

Modified
License
|| ( GPL-2 GPL-3 ) LGPL-2.1
Keywords
amd64 arm64 sparc x86 ~amd64-linux ~hppa ~ia64 ~x64-macos ~x86-linux
USE flags
X cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk

General

X
Add support for X11
cairo
Enable support for the cairo graphics library
doc
Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally
icu
Enable ICU (Internationalization Components for Unicode) support, using dev-libs/icu
java
Add support for Java
jpeg
Add JPEG image support
lapack
Add support for the virtual/lapack numerical library
minimal
Install a very minimal build (disables, for example, plugins, fonts, most drivers, non-critical features)
nls
Add Native Language Support (using gettext - GNU locale utilities)
openmp
Build support for the OpenMP (support parallel computing), requires >=sys-devel/gcc-4.2 built with USE="openmp"
perl
Add optional support/bindings for the Perl language
png
Add support for libpng (PNG images)
prefix
Defines if a Gentoo Prefix offset installation is used
profile
Add support for software performance analysis (will likely vary from ebuild to ebuild)
readline
Enable support for libreadline, a GNU line-editing library that almost everyone wants
static-libs
Build static versions of dynamic libraries as well
test
Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)
tiff
Add support for the TIFF image format
tk
Add support for Tk GUI toolkit

app-arch / bzip2 : A high-quality data compressor used extensively by Gentoo Linux

app-arch / xz-utils : utils for managing LZMA compressed files

app-misc / realpath : Return the canonicalized absolute pathname

app-portage / elt-patches : Collection of patches for libtool.eclass

app-text / ghostscript-gpl : Interpreter for the PostScript language and PDF

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

dev-lang / tk : Tk Widget Set

dev-libs / icu : International Components for Unicode

dev-libs / libpcre : Perl-compatible regular expression library

dev-libs / libpcre2 : Perl-compatible regular expression library

dev-texlive / texlive-fontsrecommended : TeXLive Recommended fonts

media-libs / libpng : Portable Network Graphics library

media-libs / tiff : Tag Image File Format (TIFF) library

net-libs / libtirpc : Transport Independent RPC library (SunRPC replacement)

net-misc / curl : A Client that groks URLs

sys-apps / coreutils : Standard GNU utilities (chmod, cp, dd, ls, sort, tr, head, wc, who,...)

sys-devel / autoconf : Used to create autoconfiguration files

sys-devel / automake : Used to generate Makefile.in from Makefile.am

sys-devel / libtool : A shared library tool for developers

sys-libs / readline : Another cute console display library

virtual / blas : Virtual for FORTRAN 77 BLAS implementation

virtual / fortran : Virtual for Fortran Compiler

virtual / jpeg : Virtual to select between libjpeg-turbo and IJG jpeg for source-based packages

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

virtual / latex-base : Virtual for basic LaTeX binaries

virtual / pkgconfig : Virtual for the pkg-config implementation

x11-libs / cairo : A vector graphics library with cross-device output support

x11-libs / libXmu : X.Org Xmu library

x11-libs / pango : Internationalized text layout and rendering library

x11-misc / xdg-utils : Portland utils for cross-platform/cross-toolkit/cross-desktop interoperability

app-arch / bzip2 : A high-quality data compressor used extensively by Gentoo Linux

app-arch / xz-utils : utils for managing LZMA compressed files

app-misc / realpath : Return the canonicalized absolute pathname

app-text / ghostscript-gpl : Interpreter for the PostScript language and PDF

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

dev-lang / tk : Tk Widget Set

dev-libs / icu : International Components for Unicode

dev-libs / libpcre : Perl-compatible regular expression library

dev-libs / libpcre2 : Perl-compatible regular expression library

media-libs / libpng : Portable Network Graphics library

media-libs / tiff : Tag Image File Format (TIFF) library

net-libs / libtirpc : Transport Independent RPC library (SunRPC replacement)

net-misc / curl : A Client that groks URLs

sys-apps / coreutils : Standard GNU utilities (chmod, cp, dd, ls, sort, tr, head, wc, who,...)

sys-libs / readline : Another cute console display library

sys-libs / zlib : Standard (de)compression library

virtual / blas : Virtual for FORTRAN 77 BLAS implementation

virtual / fortran : Virtual for Fortran Compiler

virtual / jpeg : Virtual to select between libjpeg-turbo and IJG jpeg for source-based packages

virtual / jre : Virtual for Java Runtime Environment (JRE)

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

x11-libs / cairo : A vector graphics library with cross-device output support

x11-libs / libXmu : X.Org Xmu library

x11-libs / pango : Internationalized text layout and rendering library

x11-misc / xdg-utils : Portland utils for cross-platform/cross-toolkit/cross-desktop interoperability

app-vim / vim-r : vim plugin: integrate vim with R

dev-db / plr : R language extension for postgresql database

dev-lang / yap : YAP is a high-performance Prolog compiler

dev-python / rpy : Python interface to the R Programming Language

dev-util / diffoscope : Will try to get to the bottom of what makes files or directories different

kde-apps / cantor : Interface for doing mathematics and scientific computing

sci-biology / picard : Java-based command-line utilities that manipulate SAM files

sci-libs / vtk : The Visualization Toolkit

sci-mathematics / gretl : Regression, econometrics and time-series library

sci-mathematics / rkward : IDE for the R-project

sci-mathematics / rstudio : IDE for the R language

sci-physics / root : C++ data analysis framework and interpreter from CERN

96600
install add-on packages for dev-lang/R using package managers
353545
>=dev-lang/R-3.0.1-r1 fails tests
458176
dev-lang/R - USE=X should not manage both X11 driver support and HTTP-Help support
518066
www-server/shiny-server - a server for hosting Shiny applicatins, web-sites written in dev-lang/R for interactive data analysis
575860
dev-lang/R-3.2.3 - In file included from qdCocoa.m:24: /usr/include/objc/NSObject.h:22: error: expected ‘)’ before ‘instancetype’
581320
roverlay: recommended packages need "dev-lang/R[minimal]" dependency.
631620
dev-lang/R-3.4.1 : running code in reg-tests-3.R make[3]: *** [Makefile.common:100: reg-tests-3.Rout] Error 1
665760
dev-lang/R-3.5.1 - Error: segfault from C stack overflow
687360
dev-lang/R-3.5.3 : [TEST] running code in reg-tests-1d.R make[3]: *** [Makefile.common:105: reg-tests-1d.Rout] Error 1
688284
dev-lang/R-3.6.0: cannot stat 'libRmath.a' with sh -> mksh
718056
=dev-lang/R-3.6.3-r1: test failure in reg-packages.R
729384
dev-lang/R-4.0.2 on HPPA with sys-devel/gcc-10 - dsvdc.f:107:34: Error: Expression at (1) must be of INTEGER type, found REAL
Repository mirror & CI · gentoo
Merge updates from master
Michael Orlitzky · gentoo
dev-lang/R: new version 4.0.2.
I swapped out pcre for pcre2 and had to require USE=profile to run the test suite, but other than that a copy/paste. Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
dev-lang/R: Thanks to Neil for help with bump to 4.0.0
Closes: https://bugs.gentoo.org/719210 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Mark Wright <gienah@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Michael Orlitzky · gentoo
dev-lang/R: pull in LaTeX stuff for the test suite.
At least one test (reg-packages.R) tries to run texi2dvi which in turn looks for /usr/bin/tex, and will fail without it. This commit adds IUSE=test, and pulls in virtual/latex-base when it is set. Bug: https://bugs.gentoo.org/718056 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Michael Orlitzky · gentoo
dev-lang/R: new revision that leaves more docs uncompressed.
The R interactive shell encourages users to read several documentation files using functions like contributors() and RShowDoc() that rely on the files being installed with their god-given names. This new revision tries to fix a few of the more common ones with docompress -x. Closes: https://bugs.gentoo.org/556706 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Matt Turner · gentoo
*/*: Drop stable ia64 keywords
Signed-off-by: Matt Turner <mattst88@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Michael Orlitzky · gentoo
dev-lang/R: remove old "unused" versions.
Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Michael Orlitzky · gentoo
dev-lang/R: new version 3.6.3.
I reorganized some things into BDEPEND, but other than that, a standard version bump. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
*/*: [QA] Remove redundant --docdir/--htmldir
Closes: https://github.com/gentoo/gentoo/pull/14742 Signed-off-by: David Seifert <soap@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
dev-lang/R: [QA] Fix UnnecessarySlashStrip
Signed-off-by: David Seifert <soap@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
dev-lang/R: Bump to 3.6.2
Thanks to Neil for reporting, UlvHare for testing bug #702808. Fix bug #515428 pkg-config files with wrong LDFLAGS detected, thanks to patrick for reporting. Closes: https://bugs.gentoo.org/show_bug.cgi?id=702808 Closes: https://bugs.gentoo.org/show_bug.cgi?id=515428 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Mark Wright <gienah@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
dev-lang/R: Add ~arm64 since 3.4.1 has arm64
Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Mark Wright <gienah@gentoo.org>
Mark Wright · gentoo
dev-lang/R: Remove dep sys-freebsd/freebsd-bin
Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Mark Wright <gienah@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Jeroen Roovers · gentoo
dev-lang/R: Mark ~hppa too
Package-Manager: Portage-2.3.77, Repoman-2.3.17 RepoMan-Options: --ignore-arches Signed-off-by: Jeroen Roovers <jer@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Michał Górny · gentoo
dev-lang: Remove *-fbsd KEYWORDS
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Aaron Bauman · gentoo
dev-lang/R: arm64 stable
Signed-off-by: Aaron Bauman <bman@gentoo.org> Package-Manager: Portage-2.3.69, Repoman-2.3.16 RepoMan-Options: --include-arches="arm64"
Repository mirror & CI · gentoo
Merge updates from master
Amy Liffey · gentoo
dev-lang/R: remove old 3.2.2, 3.3.2, 3.5.1
Signed-off-by: Amy Liffey <amynka@gentoo.org> Package-Manager: Portage-2.3.62, Repoman-2.3.11
Amy Liffey · gentoo
dev-lang/R: version bump 3.6.0
Bug: https://bugs.gentoo.org/684526 Signed-off-by: Amy Liffey <amynka@gentoo.org> Package-Manager: Portage-2.3.62, Repoman-2.3.11
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
sci-mathematics/R: Bump to 3.5.3, thanks Neil for reporting
Add missing dependency net-libs/libtirpc, thanks to Victor Kustov for reporting. Change dependency from x11-libs/cairo[X] to x11-libs/cairo[X=], thanks to Cedric Sodhi for reporting, Felix W for helping. Closes: https://bugs.gentoo.org/674858 Closes: https://bugs.gentoo.org/661878 Closes: https://bugs.gentoo.org/638778 Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Mark Wright <gienah@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Mikle Kolyada · gentoo
dev-lang/R: Drop hppa keyword
Signed-off-by: Mikle Kolyada <zlogene@gentoo.org> Package-Manager: Portage-2.3.49, Repoman-2.3.11
Repository mirror & CI · gentoo
Merge updates from master
Rolf Eike Beer · gentoo
dev-lang/R: stable 3.4.1 for sparc, bug #641284
Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Package-Manager: Portage-2.3.49, Repoman-2.3.10 RepoMan-Options: --include-arches="sparc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Matt Turner · gentoo
dev-lang/R: drop ppc/ppc64 keywords, bug 641284
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
dev-lang/R: Bump to 3.5.1
Thanks to Neil for reporting, Daniel M. Weeks, John Dough and Marcel Schilling for commenting. Closes: https://bugs.gentoo.org/632364 Closes: https://bugs.gentoo.org/660294 Package-Manager: Portage-2.3.41, Repoman-2.3.9
Repository mirror & CI · gentoo
Merge updates from master
Mark Wright · gentoo
dev-lang/R: Bump to 3.5.1 RC
Thanks to Neil for reporting, John Dough and Daniel M. Weeks for commenting. Bug: https://bugs.gentoo.org/632364 Package-Manager: Portage-2.3.41, Repoman-2.3.9
Thomas Deutschmann · gentoo
dev-lang/R: x86 stable (bug #641284)
Package-Manager: Portage-2.3.31, Repoman-2.3.9
Mikle Kolyada · gentoo
dev-lang/R: amd64 stable wrt bug #641284
Package-Manager: Portage-2.3.24, Repoman-2.3.6
Sergei Trofimovich · gentoo
dev-lang/R: stable 3.4.1 for ia64, bug #641284
Bug: https://bugs.gentoo.org/641284 Package-Manager: Portage-2.3.28, Repoman-2.3.9 RepoMan-Options: --include-arches="ia64"
Justin Lecher · gentoo
dev-lang/R: Drop version failing with only zlib in tree
Package-Manager: Portage-2.3.6-prefix, Repoman-2.3.2 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Sébastien Fabbro · gentoo
dev-lang/R: version bump
Package-Manager: Portage-2.3.6, Repoman-2.3.2
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
T. Malfatti · gentoo
media-libs/portaudio: Version bump
Justin Lecher · gentoo
dev-lang/R: Backport patch for zlib-1.2.10 compatibility
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=604676 Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.3.2, thanks to Neil Shephard (bug #598834)
Package-Manager: portage-2.3.3
Denis Dupeyron · gentoo
dev-lang/R: remove 3.2.5 and 3.3.0
Denis Dupeyron · gentoo
dev-lang/R: 593420
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.3.1
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.3.0, fix bug #567488
Denis Dupeyron · gentoo
dev-lang/R: remove 3.2.3 and 3.2.4
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.2.5
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.2.4
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.2.3
Justin Lecher · gentoo
dev-lang/R: Clean old
Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Agostino Sarubbo · gentoo
dev-lang/R: ppc stable wrt bug #556422
Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="ppc"
Mikle Kolyada · gentoo
dev-lang/R: sparc stable wrt bug #556422
Package-Manager: portage-2.2.20.1
Jeroen Roovers · gentoo
dev-lang/R: Stable for HPPA PPC64 (bug #556422).
Package-Manager: portage-2.2.20.1 RepoMan-Options: --ignore-arches
Mikle Kolyada · gentoo
dev-lang/R: ia64 stable wrt bug #556422
Package-Manager: portage-2.2.20.1
Agostino Sarubbo · gentoo
dev-lang/R: x86 stable wrt bug #556422
Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="x86"
Agostino Sarubbo · gentoo
dev-lang/R: amd64 stable wrt bug #556422
Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="amd64"
Justin Lecher · gentoo
Use https by default
Convert all URLs for sites supporting encrypted connections from http to https Signed-off-by: Justin Lecher <jlec@gentoo.org>
Denis Dupeyron · gentoo
dev-lang/R: bump to 3.2.2
Gentoo-Bug: 557600 Package-Manager: portage-2.2.20.1
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed