{"bugs":[{"bugid":547018,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/bioperl-1.6.9 dev-perl\/Bio-ASN1-EntrezGene-1.91.0-r1 circular dependencies"},{"bugid":804699,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"dev-perl\/Bio-ASN1-EntrezGene-1.730.0: stabilisation"},{"bugid":818547,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"dev-perl\/Bio-ASN1-EntrezGene-1.730.0[examples]: collides with sci-biology\/bioperl-1.6.9"}],"categories":[{"categoryid":450,"name":"dev-lang","summary":"The dev-lang category contains various programming language implementations and related tools."},{"categoryid":425,"name":"dev-perl","summary":"The dev-perl category contains libraries and utilities relevant to the Perl programming language."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"43e96b12402b5aabcc5e43ccc9a269f1e5a1b8fc","committime":"2022-06-29T13:16:27","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"a3c9e186756a4608cecd3180867df3cf37fbf74f","committime":"2022-06-29T11:20:09","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: drop 1.720.0"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"972f7f0fac840b1713575f295c07d0b4e50a9127","committime":"2021-10-16T23:21:17","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Closes: https:\/\/bugs.gentoo.org\/818508\nSigned-off-by: Sam James ","commitid":"66a3aabe8760c0d6aaf8ee3fde49fabde7c9db6b","committime":"2021-10-16T23:02:00","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: add missing test dependency"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"c8889c07f4353dfc69676146972cc17ec0dd249e","committime":"2021-04-24T11:19:58","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"dilfridge@gentoo.org","authorname":"Andreas K. Hüttel","body":"Package-Manager: Portage-3.0.17, Repoman-3.0.2\nSigned-off-by: Andreas K. Hüttel ","commitid":"846424a42863f6606dfed66ed5fb10668e98a461","committime":"2021-04-24T10:48:19","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: Version bump 1.73"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"fef742528aacdd4ffa4e59ea0354106ca161650e","committime":"2019-12-10T23:48:11","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"The result was achieved via the following pipeline:\n\n pkgcheck scan -c RestrictTestCheck -R FormatReporter \\\n --format '{category}\/{package}\/{package}-{version}.ebuild' |\n xargs -n32 grep -L RESTRICT |\n xargs -n32 sed -i -e '\/^IUSE=.*test\/aRESTRICT=\"!test? ( test )\"'\n\nThe resulting metadata was compared before and after the change.\nFew Go ebuilds had to be fixed manually due to implicit RESTRICT=strip\nadded by the eclass. Two ebuilds have to be fixed because of multiline\nIUSE.\n\nSuggested-by: Robin H. Johnson \nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/13942\nSigned-off-by: Michał Górny ","commitid":"064af661d0c9a31cecdf348632bc5603333a9149","committime":"2019-12-10T22:02:54","packageid":53412,"repoid":1,"summary":"*\/*: [QA] Fix trivial cases of MissingTestRestrict"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e55c63948ee7957d66f7590b9a1b8abbb40b2a8b","committime":"2017-05-31T03:21:52","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"kentnl@gentoo.org","authorname":"Kent Fredric","body":"Remove versions affected by unescaped left { in regex.\n\nPackage-Manager: Portage-2.3.5, Repoman-2.3.2","commitid":"e6b1771e09b29819d8243470426b8948d84f5327","committime":"2017-05-31T03:02:50","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: Cleanup old re bug #614938"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"cc2204aa3bdd69a92e3c1b8f07d87347f95b5b2a","committime":"2017-05-22T09:43:25","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.5, Repoman-2.3.1\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo ","commitid":"ebde519ac61c9ff936c801a761fcda7d3ab72089","committime":"2017-05-22T09:24:01","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: x86 stable wrt bug #619062"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"f8b1fe742490819896b7cf8772ace7915a9aa424","committime":"2017-05-21T08:21:49","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.5, Repoman-2.3.1\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo ","commitid":"f26d371d0c7bbcb243f29c6df533768141a1b7f4","committime":"2017-05-21T08:08:38","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: amd64 stable wrt bug #619062"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"cfccc8255153aec5297d09a03eaed1a2e25d4e8a","committime":"2017-04-07T20:21:48","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"kentnl@gentoo.org","authorname":"Kent Fredric","body":"Upstream:\n- Fix for unescaped left brace in regex\n\nBug: https:\/\/bugs.gentoo.org\/614938\nPackage-Manager: Portage-2.3.4, Repoman-2.3.2","commitid":"d97bd90df8d8d6f23b4c25a5719b905472429756","committime":"2017-04-07T20:09:40","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: Bump to 1.720.0"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":53412,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"23c377b3f79be3521d747f5c62dc5adfdbb0bb2d","committime":"2016-05-21T00:42:42","packageid":53412,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"kentfredric@gmail.com","authorname":"Kent Fredric","body":"- EAPI6\n- Add USE=\"examples\"\n- Fix broken DEPEND\/RDEPEND inversion.\n- Prune useless tests\n\nUpstream:\n- Avoid segfault running parser and run faster w\/ very long URLs in entries.\n- Added support for parsing EntrezeGene-set\n\nPackage-Manager: portage-2.2.28\nRepoMan-Options: --include-arches=\"alpha amd64 amd64-fbsd arm arm64 hppa ia64 m68k mips nios2 ppc ppc64 riscv s390 sh sparc sparc-fbsd x86 x86-fbsd\"","commitid":"99d169eba77e155ad44ac6f696ae403fc856e5a8","committime":"2016-05-10T14:39:17","packageid":53412,"repoid":1,"summary":"dev-perl\/Bio-ASN1-EntrezGene: Bump to version 1.700.0"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":53412,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":53412,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":53412,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[709866],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582}],"depending":[{"block":false,"categoryid":353,"description":"Perl tools for bioinformatics - Core modules","ebuildids":[743617,743617],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"bioperl","packageid":42900}],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":709866,"firstseen":"2021-04-24T12:26:48.671941","license":"|| ( Artistic GPL-1+ )","moddate":"2026-03-28T18:04:18","packageid":53412,"repoid":1,"slot":"0","uses":["examples","perl_features_debug","perl_features_ithreads","perl_features_quadmath","test"],"version":"1.730.0"}],"masks":[],"package":{"categoryid":425,"description":"Regular expression-based Perl Parser for NCBI Entrez Gene","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"Bio-ASN1-EntrezGene","packageid":53412},"rdependencies":[{"block":false,"categoryid":353,"description":"Perl tools for bioinformatics - Core modules","ebuildids":[709866],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"bioperl","packageid":42900},{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[709866,709866],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582},{"block":false,"categoryid":396,"description":"Virtual for parent","ebuildids":[709866],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl-parent","packageid":48288},{"block":false,"categoryid":396,"description":"Virtual for Carp","ebuildids":[709866],"firstseen":"2013-09-05T13:38:30.433857","maintainer":"kentfredric@gmail.com","maintainername":"Kent Fredric","name":"perl-Carp","packageid":61337}],"repos":[{"branch":"master","lastcommit":"f87ce2b74421571078063820dc1065e7089c9fa7","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/metacpan.org\/release\/Bio-ASN1-EntrezGene"],"uses":[{"description":"Install examples, usually source code","isdefault":false,"use":"examples"},{"description":"Enable dependencies and\/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)","isdefault":false,"use":"test"},{"description":"PERL_FEATURES setting enabling internal debug support in Perl","group":"perl_features","isdefault":false,"use":"debug"},{"description":"PERL_FEATURES setting enabling interpreter level threads, has some compatibility problems","group":"perl_features","isdefault":false,"use":"ithreads"},{"description":"PERL_FEATURES setting enabling 128bit floating point arithmetic via libquadmath","group":"perl_features","isdefault":false,"use":"quadmath"}]}