{"bugs":[],"categories":[{"categoryid":450,"name":"dev-lang","summary":"The dev-lang category contains various programming language implementations and related tools."},{"categoryid":425,"name":"dev-perl","summary":"The dev-perl category contains libraries and utilities relevant to the Perl programming language."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f1602448e781deaf6810fdf29f1fe1cd02efc24c","committime":"2024-12-21T20:48:19","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mattst88@gentoo.org","authorname":"Matt Turner","body":"Signed-off-by: Matt Turner \nSigned-off-by: Sam James ","commitid":"5e7744521466c4880076468ffccc2a6fab924a30","committime":"2024-12-21T13:32:09","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: Drop old versions"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"0b843d6e3c907d1f73ca3410437c23a0bdb3d4e4","committime":"2024-05-22T02:33:33","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"This covers more variables\/args, etc.\n\nSigned-off-by: Sam James ","commitid":"046b0c62a414d45652326dc8a7fec43df4535fb1","committime":"2024-05-22T01:59:25","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: EAPI 8, rely on eclass impls"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"10c124cb3f443677afd31c5df9ebeca2905dc995","committime":"2020-12-10T14:12:56","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-3.0.12, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"5f41dc1b2b39cdabb89c236f0e4f2e3f97c3e641","committime":"2020-12-10T13:44:20","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: Drop to unstable"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"2bd0c2d2d997b3c83c192b2f4689531b3a6ed0e3","committime":"2020-08-27T12:05:19","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Signed-off-by: Marek Szuba ","commitid":"04613b535e540c3348f1a188d65f142c7fcd622d","committime":"2020-08-27T11:38:53","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: remove old"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"8c73a1ee9d20c3a8b75c16dade019ca4a9f00120","committime":"2020-08-24T19:35:12","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"14482bf5d8c61644b6d3ea7f98b98cf78cf88bb2","committime":"2020-08-24T18:40:54","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: Stabilize 3.10.0-r1 amd64, #738212"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a0bf806a7db4b84f7131a6f24a0a4e77947cf7a2","committime":"2020-08-24T00:35:10","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"a70c0ebb2f1e3deaa75ae7cbd83f1f158c7b36ef","committime":"2020-08-23T23:32:53","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: Stabilize 3.10.0-r1 x86, #738212"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3dc094b01d6c1c6aa21fcbaff3b5418eb9f79c6c","committime":"2020-07-03T15:35:13","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"kentnl@gentoo.org","authorname":"Kent Fredric","body":"- EAPI7\n- Ensure not breaking when LD=!ccld\n- Ensure passing CFLAGS to make\/compiler\n- Populate more remote-id's in metadata.xml\n\nPackage-Manager: Portage-2.3.100, Repoman-2.3.22\nSigned-off-by: Kent Fredric ","commitid":"a90d776a610fe64027ef7fc4810423b774385ba3","committime":"2020-07-03T13:05:46","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: -r1 bump for EAPI7 + toolchain love"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3acb5691647fb78bea2fdfe9182d25478b0aadfd","committime":"2020-03-24T22:37:32","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Closes: https:\/\/bugs.gentoo.org\/713816\nPackage-Manager: Portage-2.3.89, Repoman-2.3.20\nSigned-off-by: Marek Szuba ","commitid":"9e4c8752a1e910bd8fc65e500672de0019b2cffd","committime":"2020-03-24T22:06:38","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: respect LDFLAGS"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"ddff1fa3c48404967d59a92678a022c8a854a071","committime":"2020-03-21T16:42:30","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.89, Repoman-2.3.20\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo ","commitid":"70781ce93623a893d7b70825f82cd5ff7af7e136","committime":"2020-03-21T16:28:25","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: x86 stable wrt bug #713240"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"fcc346778fa7bd488cfec5db5cf0f162fadc4475","committime":"2020-03-21T16:07:27","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.89, Repoman-2.3.20\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo ","commitid":"7360b9cc3ab3a606f7bb79f0dee235b71ed17423","committime":"2020-03-21T15:52:54","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: amd64 stable wrt bug #713240"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d70ba137c06e2e3359992497c06cba331fb9ebb1","committime":"2019-12-10T18:49:16","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"dilfridge@gentoo.org","authorname":"Andreas K. Hüttel","body":"Package-Manager: Portage-2.3.78, Repoman-2.3.17\nSigned-off-by: Andreas K. Hüttel ","commitid":"e6b799cf1cc12e78a0f0b44193d2a88ddade79af","committime":"2019-12-10T17:19:40","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: Normalize package versions"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"6d3704e86b1c57183d2a24e0b7a21609f4198ec5","committime":"2019-10-08T15:05:51","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"As recommended by pkgcheck.\n\nPackage-Manager: Portage-2.3.76, Repoman-2.3.16\nSigned-off-by: Marek Szuba ","commitid":"132c560d0979e6d43056412f5e102934c67405c7","committime":"2019-10-08T13:40:35","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: add test restrictions"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"cd5eff08d1186c52ce8a20242fe098fe63cb62e7","committime":"2019-06-10T16:04:14","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Signed-off-by: Marek Szuba \nPackage-Manager: Portage-2.3.66, Repoman-2.3.11","commitid":"22679d5bb1e6bf515d7e3098ab33c1b6b754d9ce","committime":"2019-06-10T15:21:30","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: bump to 3.01"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"f86e850e6ff1674fd71ec78e040023fcafb3b953","committime":"2018-05-01T15:33:26","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"c7a2f34a2ee25e77ae7f1d60ba55f17da3ab92da","committime":"2018-05-01T13:59:27","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Package-Manager: Portage-2.3.24, Repoman-2.3.6","commitid":"0243d563e8de7d1eb26227665892172dbf3379f6","committime":"2018-05-01T13:48:24","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: remove old"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Package-Manager: Portage-2.3.24, Repoman-2.3.6","commitid":"4f1be5045ba43a9e9596d89ab2d47e50880f6537","committime":"2018-05-01T13:11:29","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: bump to 2.11"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"c5ec6f848971b73fadf88298a676f31c0a23f5be","committime":"2018-05-01T09:10:24","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Upstream build script takes a single directory as htslib prefix, then\nappends \"include\/htslib\" while looking for header files and \"lib\" while\nlooking for library. Unsurprisingly, the latter fails to locate the htslib\nlibrary on SYMLINK_LIB=no systems.\n\nI have patched the build script to allow both htslib-includedir and\nhtslib-libdir to be provided explicitly, thus letting the ebuild take\ncare of choosing the correct libdir name for the specified\narchitecture\/ABI.\n\nCloses: https:\/\/bugs.gentoo.org\/654460\nPackage-Manager: Portage-2.3.24, Repoman-2.3.6","commitid":"f7bdf03a3823e8156f7e31aea55948702f4882e2","committime":"2018-05-01T08:45:02","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: allow explicit specification of htslib directories"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Package-Manager: Portage-2.3.24, Repoman-2.3.6","commitid":"27ae091510d5bd4fbf40ab135a302f286f4d5a8d","committime":"2018-05-01T07:47:36","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: add missing dependency"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"ecb39b43fa2faadb0d14d0bb54f300a8a111a308","committime":"2018-04-26T12:20:53","packageid":69100,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"marecki@gentoo.org","authorname":"Marek Szuba","body":"Perl bindings for sci-libs\/htslib, used by e.g. Ensembl.\n\nPackage-Manager: Portage-2.3.24, Repoman-2.3.6","commitid":"9a9cafec65f1eb3de700a077dae30537993823cc","committime":"2018-04-26T11:25:15","packageid":69100,"repoid":1,"summary":"dev-perl\/Bio-DB-HTS: new package"}],"dependencies":[{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[827156],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582},{"block":false,"categoryid":318,"description":"C library for high-throughput sequencing data formats","ebuildids":[827156],"firstseen":"2014-09-21T13:51:26.076524","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"htslib","packageid":62539},{"block":false,"categoryid":425,"description":"Build and install Perl modules","ebuildids":[827156],"firstseen":"2015-06-13T13:38:20.811266","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"Module-Build","packageid":63803}],"depending":[],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":827156,"firstseen":"2024-05-22T03:48:17.827541","license":"Apache-2.0","moddate":"2026-03-28T18:04:18","packageid":69100,"repoid":1,"slot":"0","uses":["perl_features_debug","perl_features_ithreads","perl_features_quadmath","test"],"version":"3.10.0-r2"}],"masks":[],"package":{"categoryid":425,"description":"Perl bindings for sci-libs\/htslib","firstseen":"2018-04-26T12:37:48.334952","name":"Bio-DB-HTS","packageid":69100},"rdependencies":[{"block":false,"categoryid":353,"description":"Perl tools for bioinformatics - Core modules","ebuildids":[827156],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"bioperl","packageid":42900},{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[827156,827156],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582},{"block":false,"categoryid":318,"description":"C library for high-throughput sequencing data formats","ebuildids":[827156],"firstseen":"2014-09-21T13:51:26.076524","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"htslib","packageid":62539}],"repos":[{"branch":"master","lastcommit":"52197549fd3431fa256b8edbafdcd3702dd0e134","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/metacpan.org\/release\/Bio-DB-HTS"],"uses":[{"description":"Enable dependencies and\/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)","isdefault":false,"use":"test"},{"description":"PERL_FEATURES setting enabling internal debug support in Perl","group":"perl_features","isdefault":false,"use":"debug"},{"description":"PERL_FEATURES setting enabling interpreter level threads, has some compatibility problems","group":"perl_features","isdefault":false,"use":"ithreads"},{"description":"PERL_FEATURES setting enabling 128bit floating point arithmetic via libquadmath","group":"perl_features","isdefault":false,"use":"quadmath"}]}