dev-python / scipy

Scientific algorithms library for Python

Official package sites : https://github.com/scipy/scipy/ · https://pypi.org/project/scipy/ · https://scipy.org/ ·

SciPy is an open source library of scientific tools for Python. SciPy supplements the popular numpy module, gathering a variety of high level science and engineering modules together as a single package. SciPy includes modules for graphics and plotting, optimization, integration, special functions, signal and image processing, genetic algorithms, ODE solvers, and others.

v1.13.0 :: 0 :: gentoo

Modified
License
BSD LGPL-2
Keywords
~amd64 ~arm ~arm64 ~loong ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86
USE flags
debug doc fortran test test-rust

v1.13.0_rc1 :: 0 :: gentoo

Modified
License
BSD LGPL-2
USE flags
debug doc fortran test test-rust

v1.12.0 :: 0 :: gentoo

Modified
License
BSD LGPL-2
Keywords
amd64 arm arm64 ~loong ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86
USE flags
debug doc fortran test test-rust

v1.11.4 :: 0 :: gentoo

Modified
License
BSD LGPL-2
Keywords
amd64 arm arm64 ppc64 ~loong ~ppc ~riscv ~s390 ~sparc ~x86
USE flags
debug doc fortran test test-rust

v1.11.3-r1 :: 0 :: gentoo

Modified
License
BSD LGPL-2
Keywords
amd64 arm arm64 ppc64 x86 ~loong ~riscv ~sparc
USE flags
debug doc fortran test test-rust

General

debug
Enable extra debug codepaths, like asserts and extra output. If you want to get meaningful backtraces see https://wiki.gentoo.org/wiki/Project:Quality_Assurance/Backtraces
doc
Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally
fortran
Add support for fortran
test
Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)
test-rust
Enable important test dependencies that require Rust toolchain

python_targets

pypy3
Build with PyPy3
python3_10
Build with Python 3.10
python3_11
Build with Python 3.11
python3_12
Build with Python 3.12

dev-lang / python : An interpreted, interactive, object-oriented programming language

dev-python / numpy : Fast array and numerical python library

dev-python / pypy3 : A fast, compliant alternative implementation of the Python (3.10) language

sci-libs / arpack : Arnoldi package library to solve large scale eigenvalue problems

sci-libs / umfpack : Unsymmetric multifrontal sparse LU factorization library

virtual / cblas : Virtual for BLAS C implementation

virtual / fortran : Virtual for Fortran Compiler

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

dev-lang / python : An interpreted, interactive, object-oriented programming language

dev-python / numpy : Fast array and numerical python library

dev-python / pillow : Python Imaging Library (fork)

dev-python / pypy3 : A fast, compliant alternative implementation of the Python (3.10) language

sci-libs / arpack : Arnoldi package library to solve large scale eigenvalue problems

sci-libs / umfpack : Unsymmetric multifrontal sparse LU factorization library

virtual / cblas : Virtual for BLAS C implementation

virtual / fortran : Virtual for Fortran Compiler

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

dev-python / GridDataFormats : Reading and writing of data on regular grids in Python

dev-python / aesara : Library for operating on mathematical expressions with multi-dimensional arrays

dev-python / graph-tool : An efficient python module for manipulation and statistical analysis of graphs

dev-python / lmfit : Non-Linear Least-Squares Minimization and Curve-Fitting for Python

dev-python / oct2py : Python to GNU Octave bridge

dev-python / pandas : Powerful data structures for data analysis and statistics

dev-python / patsy : Python module to describe statistical models and design matrices

dev-python / pslab : Python library for communicating with Pocket Science Lab

dev-python / pyamg : Algebraic multigrid solvers in Python

dev-python / pyqtgraph : A pure-python graphics and GUI library built on PyQt and numpy

dev-python / qiskit-aer : High performance simulator for quantum circuits that includes noise models

dev-python / qiskit-terra : Terra is the foundation on which Qiskit is built

dev-python / scikit-image : Image processing routines for SciPy

dev-python / scikit-learn : Machine learning library for Python

dev-python / seaborn : Statistical data visualization

dev-python / statsmodels : Statistical computations and models for use with SciPy

dev-python / trimesh : Python library for loading and using triangular meshes

media-video / pitivi : A non-linear video editor using the GStreamer multimedia framework

net-wireless / gnuradio : Toolkit that provides signal processing blocks to implement software radios

net-wireless / nanovna-saver : tool for reading, displaying and saving data from the NanoVNA

sci-biology / HTSeq : Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files

sci-chemistry / MDAnalysis : A python library to analyze and manipulate molecular dynamics trajectories

sci-chemistry / chemex : Program to fit chemical exchange induced shift and relaxation data

sci-libs / cantera : Object-oriented tool suite for chemical kinetics, thermodynamics, and transport

sci-libs / cartopy : Python package for geospatial data processing and analysis

sci-libs / keras-preprocessing : Easy data preprocessing and data augmentation for deep learning models

sci-libs / numkit : Numerical first aid kit (with numpy/scipy)

sci-libs / pastix : Parallel solver for very large sparse linear systems

sci-libs / rocFFT : Next generation FFT implementation for ROCm

sci-physics / qmeq : Quantum master equation package for Quantum dot transport calculations

sci-visualization / pythonprop : Scripts to prepare and plot VOACAP propagation predictions

sys-cluster / ceph : Ceph distributed filesystem

743295
dev-python/scipy fails test test_bisplev_integer_overflow Fatal Python error: Segmentation fault
750320
dev-python/scipy-1.8.1 fails to compile: source.c:(.text.startup+0x8c): undefined reference to `cblas_ddot'
788652
dev-python/scipy-1.6.2: fails 1 test on ppc64 (TestNoData.test_nodata)
814950
dev-python/scipy-1.8.1 does not respect LDFLAGS
814953
dev-python/scipy-1.8.1 installs pre-stripped files
862390
dev-python/scipy-1.9.1 installs files that contain insecure RUNPATHs
863251
dev-python/scipy-1.9.1 does not respect CFLAGS
872983
dev-python/scipy bundles boost
877515
dev-python/scipy 1.9.2 fails to build
882261
dev-python/scipy-1.9.3 - Wheel build failed
922256
dev-python/scipy-1.11.4 fails tests on x86
924078
dev-python/scipy-1.12.0: stablereq
926544
dev-python/scipy-1.12.0 fails to compile: _interpolativemodule.c:647:41: error: passing argument 1 of PyPySequence_List from incompatible pointer type [-Wincompatible-pointer-types]
926623
dev-python/scipy-1.12.0 fails tests on ppc64 BE: scipy/ndimage/tests/test_morphology.py::TestNdimageMorphology::test_distance_transform_cdt05[*] - assert 28 == -21
928727
dev-python/scipy-1.13.0 build fails with internal compiler error
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.13.0
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Use := slot op for numpy dep
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.13.0_rc1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.12.0 amd64, #924078
Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.12.0 arm64, #924078
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Stabilize 1.12.0 arm, #924078
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.12.0
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Eli Schwartz · gentoo
dev-python/scipy: filter LTO since it is unsafe
The underlying issue is really just a lot of old fortran code. Not all compiled modules are actually LTO-unsafe. But handling this granularly requires good cooperation with the build system. I handled this upstream via https://github.com/scipy/scipy/pull/19857. While we wait for scipy 1.13.0 to be released, prevent older scipy versions from using LTO. Signed-off-by: Eli Schwartz <eschwartz93@gmail.com> Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
Move {dev-util → dev-build}/meson
Signed-off-by: Michał Górny <mgorny@gentoo.org> Closes: https://github.com/gentoo/gentoo/pull/34790 Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Matoro Mahri · gentoo
dev-python/scipy: Stabilize 1.11.4 arm64, #919556
Signed-off-by: Matoro Mahri <matoro_gentoo@matoro.tk> Signed-off-by: Ionen Wolkens <ionen@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: unkeyword for ~ia64
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Stabilize 1.11.4 ppc64, #919556
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Michał Górny · gentoo
dev-python/scipy: Stabilize 1.11.4 amd64, #919556
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Stabilize 1.11.4 arm, #919556
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.11.4 s390, #916250
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.11.4 ppc, #916250
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.3-r1 x86, #917382
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.11.3-r1 ppc64, #917382
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Add ~ppc64 to 1.11.3-r1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.11.4 ppc64, #916250
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.3-r1 arm64, #917382
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Deselect timing out/hanging tests globally
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Michał Górny · gentoo
dev-python/scipy: Bump to 1.11.4
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Enable pypy3
Sponsored-by: Ex Makhina, Inc. <info-gentoo@exmakhina.com> Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.11.3-r1 arm, #917382
Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.3-r1 amd64, #917382
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.11.3-r1 sparc, #916250
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Enable py3.12
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.11.3
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.2 amd64, #914693
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.2 ppc64, #914693
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.2 arm64, #914693
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.11.2 arm, #914693
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.11.1 amd64, #911362
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Sam James · gentoo
dev-python/scipy: Stabilize 1.11.1 arm, #911362
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.11.1 arm64, #911362
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.11.2
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Benda Xu · gentoo
dev-python/scipy: do not use patchelf on macOS.
macOS uses Mach-O binary format, not ELF. Signed-off-by: Benda Xu <heroxbd@gentoo.org>
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Benda Xu · gentoo
dev-python/scipy: keyword it and its dependences.
keyword 1.11.1 for ~arm64-macos, ~x64-macos dev-python/gast: keyword 0.5.3-r1 for ~arm64-macos, ~x64-macos dev-python/beniget: keyword 0.4.1-r1 for ~arm64-macos, ~x64-macos dev-python/pythran: keyword 0.13.1 for ~arm64-macos, ~x64-macos sci-libs/gklib: keyword 5.1.1_p20230327-r1 for ~arm64-macos, ~x64-macos sci-libs/metis: keyword 5.2.1-r2 for ~arm64-macos, ~x64-macos sci-libs/ccolamd: keyword 2.9.6 for ~arm64-macos, ~x64-macos sci-libs/camd: keyword 2.4.6-r1 for ~arm64-macos, ~x64-macos sci-libs/colamd: keyword 2.9.6 for ~arm64-macos, ~x64-macos sci-libs/cholmod: keyword 3.0.14 for ~arm64-macos, ~x64-macos sci-libs/suitesparseconfig: keyword 5.4.0 for ~arm64-macos, ~x64-macos sci-libs/amd: keyword 2.4.6-r1 for ~arm64-macos, ~x64-macos sci-libs/umfpack: keyword 5.7.9 for ~arm64-macos, ~x64-macos sci-libs/arpack: keyword 3.8.0 for ~arm64-macos, ~x64-macos dev-python/charset-normalizer: keyword 3.2.0 for ~arm64-macos, ~x64-macos dev-python/requests: keyword 2.31.0 for ~arm64-macos, ~x64-macos dev-python/pooch: keyword 1.7.0 for ~arm64-macos, ~x64-macos Signed-off-by: Benda Xu <heroxbd@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Add a patch for Cython-3
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Require <dev-python/cython-3
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.11.1
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: drop 1.11.0
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: backport det(1x1) fix
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: use new Pythran option
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.11.0
Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: destabilize for ~ppc
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Matoro Mahri · gentoo
dev-python/scipy: Keyword 1.10.1 ia64, #862330
Signed-off-by: Matoro Mahri <matoro@users.noreply.github.com> Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Fix ignoring tests with !pooch
Closes: https://bugs.gentoo.org/904975 Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Set DISTUTILS_EXT=1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Michał Górny · gentoo
dev-python/scipy: Remove obsolete EPYTEST_DESELECT entries
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Put EPYTEST_* in python_test() for readability
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.9.3 x86, #883529
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.9.3 ppc, #883529
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.10.1 s390, #889812
Signed-off-by: Sam James <sam@gentoo.org>
WANG Xuerui · gentoo
dev-python/scipy: keyword 1.10.1 for ~loong
Entirety of test suite pass except for test_data.py error: it seems the conditional disabling of pooch didn't work on loong. Keywording nevertheless because everything else is working, and majority of users are not expected to have the time-consuming tests enabled. Signed-off-by: WANG Xuerui <xen0n@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 x86, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 arm64, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 ppc, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 amd64, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 ppc64, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.1 arm, #902941
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.10.1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.0 x86, #892367
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.0 amd64, #892367
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.0 arm64, #892367
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.0 ppc64, #892367
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.10.0 arm, #892367
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 riscv, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 sparc, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 x86, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 ppc64, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 ppc, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 arm64, #889812
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.10.0 arm, #889812
Signed-off-by: Sam James <sam@gentoo.org>
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David Seifert · gentoo
*/*: remove py3.8 from PYTHON_COMPAT
Signed-off-by: David Seifert <soap@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add USE=test-rust
pooch -> ... -> paramiko, which is masked on wd40 Bug: https://bugs.gentoo.org/889812 Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: forward -hppa
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: drop 1.9.9999
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: add 1.10.0
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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WANG Xuerui · gentoo
dev-python/scipy: forward ~loong
Signed-off-by: WANG Xuerui <xen0n@gentoo.org>
WANG Xuerui · gentoo
dev-python/scipy: keyword 1.9.3 for ~loong
Signed-off-by: WANG Xuerui <xen0n@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.9.3 amd64, #883529
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.9.3 arm, #883529
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.9.3 arm64, #883529
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.9.3 ppc64, #883529
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Pass -Dblas, -Dlapack via DISTUTILS_ARGS
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Workaround build failure w/ setuptools-65.6.0
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.9.3 ia64, #862330
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.9.3 sparc, #862330
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: drop 1.9.1
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: fix pkg_setup optionality for fortran, rename USE=pythran
This still doesn't fix USE=-fortran builds, but reported that upstream now. Bug: https://bugs.gentoo.org/878361 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: switch to python_configure_all
I don't think this is sufficient though. Bug: https://bugs.gentoo.org/878361 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.9.2 x86, #868813
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.9.2 amd64, #868813
Signed-off-by: Sam James <sam@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: Stabilize 1.9.2 arm, #868813
Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: Stabilize 1.9.2 ppc64, #868813
Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
dev-python/scipy: Stabilize 1.9.2 ppc, #868813
Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
dev-python/scipy: Stabilize 1.9.2 arm64, #868813
Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.9.3
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.9.2 ppc, #862330
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.9.2 s390, #862330
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.9.2 x86, #862330
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.9.2 arm, #862330
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: add 1.9.2
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: drop 1.9.0-r1
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: disable docs for live
Closes: https://bugs.gentoo.org/872122 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.9.1
Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.9.0-r1 arm64, #862330
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: fix USE=doc
Closes: https://bugs.gentoo.org/862567 Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.9.0-r1 ppc64, #862330
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Jakov Smolić · gentoo
dev-python/scipy: Keyword 1.9.0-r1 riscv, #862330
Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
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Sam James · gentoo
dev-python/scipy: depend on umfpack
Some of the logic got gutted (hence what I said in d133f35f892233784f38a3913c6b61c7490a47ad) but it still automagically uses umfpack if it can. Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: drop 1.9.0_rc3
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: drop useless IUSE=sparse, fix USE=doc
Seems to have gone a while ago upstream. Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: skip known test failures
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: add 1.9.0
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.9.0_rc3, drop 1.9.0_rc2
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.9.0_rc2
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.9.0_rc1
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: arm stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="arm" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: arm64 stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="arm64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: x86 stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
dev-python/scipy: ppc64 stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
dev-python/scipy: ppc stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #853388
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.9.9999 for Meson testing
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.8.1
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Update HOMEPAGE
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: x86 stable wrt bug #835550
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: ppc stable wrt bug #835550
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Jakov Smolić · gentoo
dev-python/scipy: Stabilize 1.8.0 arm, #835550
Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.8.0 ppc64, #835550
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Jakov Smolić · gentoo
dev-python/scipy: Stabilize 1.8.0 arm64, #835550
Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #835550
Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.7.3 ppc, #829530
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.7.3 ppc64, #829530
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Jakov Smolić · gentoo
dev-python/scipy: Fix src_prepare phase on x86
scipy/sparse/linalg/isolve/tests/test_iterative.py was removed in between recent version changes which caused the prepare phase to fail on x86. Closes: https://bugs.gentoo.org/833291 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.8.0
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.7.3 arm, #829530
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Repository mirror & CI · gentoo
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.7.1-r1 ppc64, #821817
Signed-off-by: Sam James <sam@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: x86 stable wrt bug #829530
Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #829530
Package-Manager: Portage-3.0.28, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.7.3 ppc, #814851
Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Stabilize 1.7.3 arm64, #829530
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: backport ~ppc64 to 1.7.1-r1
Bug: https://bugs.gentoo.org/821817 Signed-off-by: Sam James <sam@gentoo.org>
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Arthur Zamarin · gentoo
dev-python/scipy: Keyword 1.7.3 ppc64, #814851
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: use pytest (again)
- Fixes tests with Python 3.10 (avoids a DeprecationWarning in distutils) - Try to use pytest-xdist again to speed things up. Seems to work now and be a bit faster (although it wasn't clear it was faster in the past for others). Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.7.3
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.3 x86, #813567
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.7.1-r1 arm, #821817
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.3 ppc64, #813567
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.6.3 ppc, #813567
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: keyword 1.7.2 for -hppa
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: mark as -hppa
This reverts commit e8f2dcda97e4dc66512a41dd6baaaf41a2b46e05. Can't be built: ``` /var/tmp/portage/dev-python/scipy-1.7.2/work/scipy-1.7.2-python3_9/scipy/stats/_boost/include/func_defs.hpp:96:33: required from ‘RealType boost_isf(RealType, const Args ...) [with Dst = boost::math::beta_distribution; RealType = long double; Args = {long double, long double}]’ scipy/stats/_boost/src/beta_ufunc.cxx:3902:46: required from here /var/tmp/portage/dev-python/scipy-1.7.2/work/scipy-1.7.2-python3_9/scipy/_lib/boost/boost/math/tools/promotion.hpp:148:37: error: static assertion failed: Sorry, but this platform does not have sufficient long double support for the special functions to be reliably implemented. 148 | BOOST_STATIC_ASSERT_MSG((0 == ::boost::is_same<type, long double>::value), "Sorry, but this platform does not have sufficient long double support for the special functions to be reliably implemented."); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ``` Bug: https://bugs.gentoo.org/804115 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.7.2 hppa, #804115
Signed-off-by: Sam James <sam@gentoo.org>
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Jakov Smolić · gentoo
dev-python/scipy: Skip broken test_fitpack on 1.6.3 as well
Bug: https://bugs.gentoo.org/743295 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
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Sam James · gentoo
dev-python/scipy: add 1.7.2
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.7.1-r1 sparc, #804115
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.7.1-r1 arm64, #821817
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.7.1-r1 ia64, #804115
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.7.1-r1 s390, #804115
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Keyword 1.7.1-r1 arm, #814851
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.7.1-r1 amd64, #821817
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: Stabilize 1.7.1-r1 x86, #821817
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: enable pythran by default
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: fix DoubleEmptyLine
Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: skip known-failing 32-bit tests
There's some more work in 1.7.2 (coming soon) which should help a bit. Signed-off-by: Sam James <sam@gentoo.org>
Sam James · gentoo
dev-python/scipy: add upstream fix for 32-bit test failures (pythran)
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: make pythran optional
Bug: https://bugs.gentoo.org/804115 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: skip known-failing longstanding test failure
Known broken upstream for years (ditto in Gentoo). Other tests seem okay and we're going to have to hope that's sufficient until there's a resolution upstream. Other distros are trying to battle this too. Bug: https://bugs.gentoo.org/743295 Bug: https://github.com/scipy/scipy/issues/9245 Bug: https://github.com/scipy/scipy/issues/12401 Bug: https://github.com/scipy/scipy/issues/12471 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.3 arm64, #813567
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Keyword 1.7.1 arm64, #814851
Signed-off-by: Sam James <sam@gentoo.org>
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Marek Szuba · gentoo
dev-python/scipy: keyword 1.7.1 for ~riscv
Signed-off-by: Marek Szuba <marecki@gentoo.org>
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Sam James · gentoo
dev-python/scipy: raise lower bound on cython
Closes: https://bugs.gentoo.org/747955 Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.3 arm, #813567
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.7.1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove unused multiprocessing inherit
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Michał Górny · gentoo
dev-python/scipy: Skip tests broken by new lapack
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Rolf Eike Beer · gentoo
dev-python/scipy: keyworded 1.6.3 for sparc, bug #804115
Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sam James <sam@gentoo.org>
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Marek Szuba · gentoo
dev-python/scipy: keyword 1.6.3 for ~riscv
Builds and installs fine, tests fail exactly the same way as on an up-to-date ~amd64 system (8 out of 16 mismatched elements in TestSchur.test_sort, 1 out of 4 mismatched elements in test_solve_discrete_are). Signed-off-by: Marek Szuba <marecki@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Enable py3.10
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #794406
Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.2 x86, #788544
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.2 amd64, #788544
Signed-off-by: Sam James <sam@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.2 ppc64, #788544
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.6.3
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.6.2
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.1 ppc64, #778140
Signed-off-by: Sam James <sam@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #778140
Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #771471
Package-Manager: Portage-3.0.13, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Sam James · gentoo
dev-python/scipy: Stabilize 1.6.0 ppc64, #771471
Signed-off-by: Sam James <sam@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.6.1
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
*/*: Remove obsolete values from PYTHON_COMPAT
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Agostino Sarubbo · gentoo
dev-python/scipy: amd64 stable wrt bug #756619
Package-Manager: Portage-3.0.9, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
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Fabian Groffen · gentoo
dev-python/scipy: drop x86-macos
Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Fabian Groffen <grobian@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.6.0
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.5.4
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Bump to 1.5.3
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
dev-python/scipy: Remove old
Signed-off-by: Michał Górny <mgorny@gentoo.org>
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Michał Górny · gentoo
Move {sci-libs → dev-python}/scipy
Signed-off-by: Michał Górny <mgorny@gentoo.org>