Versions
v9999 :: 0 :: gentoo
- Modified
- License
- GPL-3+
- USE flags
- test
v2.0.2 :: 0 :: gentoo
- Modified
- License
- GPL-3+
- Keywords
- ~amd64
- USE flags
- test
USE flags
General
- test
- Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)
python_targets
- python3_10
- Build with Python 3.10
- python3_11
- Build with Python 3.11
Dependencies
dev-python / matplotlib : Pure python plotting library with matlab like syntax
dev-python / numpy : Fast array and numerical python library
dev-python / pandas : Powerful data structures for data analysis and statistics
dev-python / scipy : Scientific algorithms library for Python
sci-biology / pysam : Python interface for the SAM/BAM sequence alignment and mapping format
Runtime Dependencies
dev-lang / python : An interpreted, interactive, object-oriented programming language
dev-python / numpy : Fast array and numerical python library
sci-biology / pysam : Python interface for the SAM/BAM sequence alignment and mapping format
Bugs
- 910015
- sci-biology/HTSeq: needs to use PEP517 build (DistutilsNonPEP517Build)
Change logs
- Repository mirror & CI · gentoo
Merge updates from master - Andrew Ammerlaan · gentoo
sci-biology/HTSeq: enable py3.11
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - David Seifert · gentoo
*/*: remove py3.8 from PYTHON_COMPAT
Signed-off-by: David Seifert <soap@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - David Seifert · gentoo
sci-biology/HTSeq: drop 0.12.4
Closes: https://bugs.gentoo.org/809662 Closes: https://bugs.gentoo.org/846221 Signed-off-by: David Seifert <soap@gentoo.org> - David Seifert · gentoo
sci-biology/HTSeq: sync live ebuild
Signed-off-by: David Seifert <soap@gentoo.org> - David Seifert · gentoo
sci-biology/HTSeq: add 2.0.2
Bug: https://bugs.gentoo.org/809662 Bug: https://bugs.gentoo.org/846221 Signed-off-by: David Seifert <soap@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michał Górny · gentoo
*/*: Remove obsolete values from PYTHON_COMPAT
Signed-off-by: Michał Górny <mgorny@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - David Seifert · gentoo
sci-biology/HTSeq: Remove old
* Remove the package.mask entry again Closes: https://bugs.gentoo.org/696484 Closes: https://bugs.gentoo.org/718466 Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert <soap@gentoo.org> - David Seifert · gentoo
sci-biology/HTSeq: Sync live ebuild
Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert <soap@gentoo.org> - David Seifert · gentoo
sci-biology/HTSeq: Bump to 0.12.4
Bug: https://bugs.gentoo.org/696484 Bug: https://bugs.gentoo.org/718466 Package-Manager: Portage-3.0.1, Repoman-2.3.23 Signed-off-by: David Seifert <soap@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michał Górny · gentoo
sci-biology/HTSeq: Remove Python 2
Signed-off-by: Michał Górny <mgorny@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michał Górny · gentoo
*/*: Clean PYTHON_COMPAT of obsolete impls
Closes: https://github.com/gentoo/gentoo/pull/14246 Signed-off-by: Michał Górny <mgorny@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michał Górny · gentoo
*/*: Remove python3_4 PYTHON_COMPAT correctly
Signed-off-by: Michał Górny <mgorny@gentoo.org> - David Seifert · gentoo
sci-biology/HTSeq: Initial addition
Closes: https://github.com/gentoo/sci/pull/814 Package-Manager: Portage-2.3.14, Repoman-2.3.6