sci-biology / STAR

STAR aligner: align RNA-seq reads to reference genome uncompressed suffix arrays

Official package sites : https://github.com/alexdobin/STAR ·

v2.7.10a :: 0 :: gentoo

Modified
License
GPL-3
Keywords
~amd64

sci-libs / htslib : C library for high-throughput sequencing data formats

sci-libs / htslib : C library for high-throughput sequencing data formats

863080
sci-biology/STAR-2.7.10a - SharedMemory.cpp: error: _key was not declared in this scope
873019
sci-biology/STAR-2.7.10a fails to compile (MUSL): SharedMemory.h:142:27: error: expected ) before key
898110
sci-biology/STAR-2.7.10a fails to compile (MUSL-CLANG-SYSTEM): SharedMemory.h:142:22: error: unknown type name key_t
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
sci-biology/STAR: fix GCC 12 build
Closes: https://bugs.gentoo.org/840586 Signed-off-by: David Seifert <soap@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
sci-biology/STAR: drop 2.5.3a
Closes: https://bugs.gentoo.org/716300 Closes: https://bugs.gentoo.org/736056 Closes: https://bugs.gentoo.org/741152 Signed-off-by: David Seifert <soap@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
sci-biology/STAR: unbundle htslib properly
Closes: https://bugs.gentoo.org/833770 Signed-off-by: David Seifert <soap@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Andrew Ammerlaan · gentoo
sci-biology/STAR: add version 2.7.10a
Closes: https://bugs.gentoo.org/696714 Bug: https://bugs.gentoo.org/741152 Bug: https://bugs.gentoo.org/736056 Bug: https://bugs.gentoo.org/716300 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
David Seifert · gentoo
sci-biology/STAR: Initial addition
Closes: https://github.com/gentoo/sci/pull/814 Package-Manager: Portage-2.3.14, Repoman-2.3.6