{"bugs":[{"bugid":863080,"firstseen":"2022-08-02T17:06:07.425050","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/STAR-2.7.10a - SharedMemory.cpp: error: _key was not declared in this scope"},{"bugid":873019,"firstseen":"2022-09-26T10:54:35.405922","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/STAR-2.7.10a fails to compile (MUSL): SharedMemory.h:142:27: error: expected ) before key"},{"bugid":898110,"firstseen":"2023-02-27T11:06:12.747843","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/STAR-2.7.10a fails to compile (MUSL-CLANG-SYSTEM): SharedMemory.h:142:22: error: unknown type name key_t"}],"categories":[{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"b66fe0a8c4c29f620e83742508eae1e57c3cf805","committime":"2022-05-07T13:17:59","packageid":68457,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/840586\nSigned-off-by: David Seifert <soap@gentoo.org>","commitid":"1f20252245bf55c15c8664783024d06c1eaf6c6a","committime":"2022-05-07T13:13:13","packageid":68457,"repoid":1,"summary":"sci-biology\/STAR: fix GCC 12 build"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"9fb51bf527fbf8d9703d8b8e162f57d3df006be2","committime":"2022-05-07T11:17:58","packageid":68457,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/716300\nCloses: https:\/\/bugs.gentoo.org\/736056\nCloses: https:\/\/bugs.gentoo.org\/741152\nSigned-off-by: David Seifert <soap@gentoo.org>","commitid":"bcd5ba73fe296ee35a11a3ee96a62a35afa4ac0a","committime":"2022-05-07T11:01:01","packageid":68457,"repoid":1,"summary":"sci-biology\/STAR: drop 2.5.3a"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f2657d87957c1a2fcd3ac06d8a181dd05046450c","committime":"2022-02-19T20:06:50","packageid":68457,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/833770\nSigned-off-by: David Seifert <soap@gentoo.org>","commitid":"49b36caac2597482c792bee0884ae34bea231806","committime":"2022-02-19T19:56:01","packageid":68457,"repoid":1,"summary":"sci-biology\/STAR: unbundle htslib properly"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"75f1dd34011eb4f73dd2756aed79f53ca9e44ec1","committime":"2022-02-19T11:51:45","packageid":68457,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"andrewammerlaan@gentoo.org","authorname":"Andrew Ammerlaan","body":"Closes: https:\/\/bugs.gentoo.org\/696714\nBug: https:\/\/bugs.gentoo.org\/741152\nBug: https:\/\/bugs.gentoo.org\/736056\nBug: https:\/\/bugs.gentoo.org\/716300\nPackage-Manager: Portage-3.0.30, Repoman-3.0.3\nSigned-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>","commitid":"3596083589625a3c954deccfdfb899b49a53a131","committime":"2022-02-19T11:43:23","packageid":68457,"repoid":1,"summary":"sci-biology\/STAR: add version 2.7.10a"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"eb8f2a1a8dfb251fc9fcc08419d610af3d87f162","committime":"2017-11-16T13:31:12","packageid":68457,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/github.com\/gentoo\/sci\/pull\/814\nPackage-Manager: Portage-2.3.14, Repoman-2.3.6","commitid":"acd76729254ed012b6898eb33fcc59ab8c2076e4","committime":"2017-11-16T12:32:54","packageid":68457,"repoid":1,"summary":"sci-biology\/STAR: Initial addition"}],"dependencies":[{"block":false,"categoryid":318,"description":"C library for high-throughput sequencing data formats","ebuildids":[740765],"firstseen":"2014-09-21T13:51:26.076524","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"htslib","packageid":62539}],"depending":[],"ebuilds":[{"archs":["~amd64"],"ebuildid":740765,"firstseen":"2022-02-19T12:03:33.072594","license":"GPL-3","moddate":"2024-12-17T22:35:47","packageid":68457,"repoid":1,"slot":"0","uses":[],"version":"2.7.10a"}],"masks":[],"package":{"categoryid":353,"description":"STAR aligner: align RNA-seq reads to reference genome uncompressed suffix arrays","firstseen":"2017-11-16T13:46:45.075214","name":"STAR","packageid":68457},"rdependencies":[{"block":false,"categoryid":318,"description":"C library for high-throughput sequencing data formats","ebuildids":[740765],"firstseen":"2014-09-21T13:51:26.076524","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"htslib","packageid":62539}],"repos":[{"branch":"master","lastcommit":"2e91124203ca06aeb2c92ae97feeecd17fa0ec59","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/github.com\/alexdobin\/STAR"],"uses":[]}