{"bugs":[{"bugid":919254,"firstseen":"2023-12-05T09:05:19.125338","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/bfast-0.7.0a - RGMatch.c: error: passing argument 1 of feof from incompatible pointer type [-Wincompatible-pointer-types]"}],"categories":[{"categoryid":425,"name":"dev-perl","summary":"The dev-perl category contains libraries and utilities relevant to the Perl programming language."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e817756739654c06c8a96e8fb68a3da1ba3af055","committime":"2024-04-30T18:48:55","packageid":51486,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"watermanpaint@posteo.net","authorname":"Lucio Sauer","body":"bump copyright of touched ebuilds to 2024\n\nSigned-off-by: Lucio Sauer \nSigned-off-by: Michał Górny ","commitid":"794061a3298b5716db015defa7b3e2c583b73980","committime":"2024-04-12T10:47:52","packageid":51486,"repoid":1,"summary":"*\/*: inline mirror:\/\/sourceforge"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3ed82613a951dfc0c3b974a2f306505741313cf5","committime":"2021-03-13T21:21:10","packageid":51486,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/625490\nPackage-Manager: Portage-3.0.17, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"9fe8b408c10d5ec964cf93f92926b014fe4697f1","committime":"2021-03-13T21:07:14","packageid":51486,"repoid":1,"summary":"sci-biology\/bfast: Port to EAPI 7"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"fef742528aacdd4ffa4e59ea0354106ca161650e","committime":"2019-12-10T23:48:11","packageid":51486,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"The result was achieved via the following pipeline:\n\n pkgcheck scan -c RestrictTestCheck -R FormatReporter \\\n --format '{category}\/{package}\/{package}-{version}.ebuild' |\n xargs -n32 grep -L RESTRICT |\n xargs -n32 sed -i -e '\/^IUSE=.*test\/aRESTRICT=\"!test? ( test )\"'\n\nThe resulting metadata was compared before and after the change.\nFew Go ebuilds had to be fixed manually due to implicit RESTRICT=strip\nadded by the eclass. Two ebuilds have to be fixed because of multiline\nIUSE.\n\nSuggested-by: Robin H. Johnson \nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/13942\nSigned-off-by: Michał Górny ","commitid":"064af661d0c9a31cecdf348632bc5603333a9149","committime":"2019-12-10T22:02:54","packageid":51486,"repoid":1,"summary":"*\/*: [QA] Fix trivial cases of MissingTestRestrict"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":51486,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":51486,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"2a988d6ed9aa6769d5a0612e107231d192588fc4","committime":"2015-12-25T12:58:24","packageid":51486,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Gentoo-Bug: https:\/\/bugs.gentoo.org\/show_bug.cgi?id=569656\n\nPackage-Manager: portage-2.2.26\nSigned-off-by: Justin Lecher ","commitid":"7820d699763ed59870d592a1ae2cc4e23b776fe2","committime":"2015-12-25T11:43:04","packageid":51486,"repoid":1,"summary":"sci-biology\/bfast: Fix inlining"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":51486,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":51486,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":51486,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[],"depending":[],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":364450,"firstseen":"2011-11-28T14:34:32.955664","license":"GPL-2","moddate":"2024-12-17T22:35:47","packageid":51486,"repoid":1,"slot":"0","uses":["test"],"version":"0.7.0a"}],"masks":[],"package":{"categoryid":353,"description":"Blat-like Fast Accurate Search Tool","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"bfast","packageid":51486},"rdependencies":[{"block":false,"categoryid":425,"description":"An API for simple XML files","ebuildids":[364450],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"XML-Simple","packageid":55080}],"repos":[{"branch":"master","lastcommit":"651fc8052593c76a95432cb9894d1c0f5deed9e4","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/sourceforge.net\/projects\/bfast\/"],"uses":[{"description":"Enable dependencies and\/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)","isdefault":false,"use":"test"}]}