sci-biology / clustalw-mpi

An MPI implemention of the ClustalW general purpose multiple alignment algorithm

Official package sites : ·

v0.13-r3 :: 0 :: gentoo

~amd64 ~x86
USE flags
mpi-njtree static-pairalign


Use MPI (as opposed to serial) code for computing neighbor-joining trees
Use static (as opposed to dynamic) scheduling for pair alignments

virtual / mpi : Virtual for Message Passing Interface (MPI) v2.0 implementation

virtual / mpi : Virtual for Message Passing Interface (MPI) v2.0 implementation

sci-biology/clustalw-mpi-0.13-r3 - interface.c: error: non-void function check_param should return a value
sci-biology/clustalw-mpi-0.13-r3 - stupid.c: error: implicit declaration of function pforward_pass [-Werror=implicit-function-decl
sci-biology/clustalw-mpi-0.13-r3 - interface.c: error: return with no value, in function returning non-void [-Wreturn-mismatch]
Repository mirror & CI · gentoo
Merge updates from master
David Seifert · gentoo
sci-biology/clustalw-mpi: Port to EAPI 7
* Rename USE flags to avoid underscore * Fix building against GCC 10 / -fno-common Closes: Closes: Package-Manager: Portage-3.0.8, Repoman-3.0.2 Signed-off-by: David Seifert <>
David Seifert · gentoo
sci-biology/clustalw-mpi: Modernise to EAPI 6
Package-Manager: Portage-2.3.4, Repoman-2.3.2 Closes:
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <>
David Seifert · gentoo
sci-biology/clustalw-mpi: Fix overlong DESCRIPTION
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes:
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <> X-Thanks: Alec Warner <> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <> - validation scripts X-Thanks: Patrick Lauer <> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed