{"bugs":[{"bugid":875461,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/clustalw-mpi-0.13-r3 - interface.c: error: non-void function check_param should return a value"},{"bugid":883663,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/clustalw-mpi-0.13-r3 - stupid.c: error: implicit declaration of function pforward_pass [-Werror=implicit-function-decl"},{"bugid":919251,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/clustalw-mpi-0.13-r3 - interface.c: error: return with no value, in function returning non-void [-Wreturn-mismatch]"}],"categories":[{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e332bcf48978c21cd488743047c02d61bc77bcce","committime":"2020-11-01T19:05:14","packageid":43775,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"* Rename USE flags to avoid underscore\n* Fix building against GCC 10 \/ -fno-common\n\nCloses: https:\/\/bugs.gentoo.org\/695122\nCloses: https:\/\/bugs.gentoo.org\/706960\nPackage-Manager: Portage-3.0.8, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"c76141a9ed378795deac9e8fdd8f9ff5e6b1b91b","committime":"2020-11-01T18:36:24","packageid":43775,"repoid":1,"summary":"sci-biology\/clustalw-mpi: Port to EAPI 7"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"40c06e440a62c7335d4881fd0ba2ea9ee97e80db","committime":"2017-03-08T22:22:11","packageid":43775,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.4, Repoman-2.3.2\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/4165","commitid":"1aac1736236bb22fb135f1154a4fa250a8bbe05a","committime":"2017-03-08T21:35:40","packageid":43775,"repoid":1,"summary":"sci-biology\/clustalw-mpi: Modernise to EAPI 6"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":43775,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":43775,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e276789fbac1f63ee217f1146713347048bdbfe3","committime":"2017-02-06T21:38:43","packageid":43775,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/3856","commitid":"6a11bee690bba5d3de48be84eca0d7c90508f841","committime":"2017-02-06T20:48:02","packageid":43775,"repoid":1,"summary":"sci-biology\/clustalw-mpi: Fix overlong DESCRIPTION"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":43775,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":43775,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":43775,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":396,"description":"Virtual for Message Passing Interface (MPI) v2.0 implementation","ebuildids":[690564],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"cluster@gentoo.org","maintainername":"Gentoo Cluster Project","name":"mpi","packageid":42101}],"depending":[],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":690564,"firstseen":"2020-11-01T19:19:41.272296","license":"public-domain","moddate":"2026-03-22T20:20:57","packageid":43775,"repoid":1,"slot":"0","uses":["mpi-njtree","static-pairalign"],"version":"0.13-r3"}],"masks":[],"package":{"categoryid":353,"description":"An MPI implemention of the ClustalW general purpose multiple alignment algorithm","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"clustalw-mpi","packageid":43775},"rdependencies":[{"block":false,"categoryid":396,"description":"Virtual for Message Passing Interface (MPI) v2.0 implementation","ebuildids":[690564],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"cluster@gentoo.org","maintainername":"Gentoo Cluster Project","name":"mpi","packageid":42101}],"repos":[{"branch":"master","lastcommit":"43a4988e0fa15f038220ebd74aa888ace0c9b303","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["http:\/\/www.bii.a-star.edu.sg\/achievements\/applications\/clustalw\/index.php"],"uses":[{"description":"Use MPI (as opposed to serial) code for computing neighbor-joining trees","isdefault":false,"packageid":43775,"use":"mpi-njtree"},{"description":"Use static (as opposed to dynamic) scheduling for pair alignments","isdefault":false,"packageid":43775,"use":"static-pairalign"}]}