sci-biology / diya

Do It Yourself Annotation, tools & libraries for sequence assembly & annotation

Official package sites : http://gmod.org/wiki/Diya ·

v1.0_rc4 :: 0 :: gentoo

Modified
License
GPL-3
Keywords
~amd64 ~x86
USE flags
minimal

General

minimal
Install a very minimal build (disables, for example, plugins, fonts, most drivers, non-critical features)

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

dev-perl / Data-Utilities : Merge nested Perl data structures

dev-perl / XML-Simple : An API for simple XML files

sci-biology / bioperl : Perl tools for bioinformatics - Core modules

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

dev-perl / Data-Utilities : Merge nested Perl data structures

dev-perl / XML-Simple : An API for simple XML files

sci-biology / bioperl : Perl tools for bioinformatics - Core modules

sci-biology / glimmer : An HMM-based microbial gene finding system from TIGR

sci-biology / infernal : Inference of RNA alignments

sci-biology / mummer : A rapid whole genome aligner

sci-biology / trnascan-se : tRNA detection in large-scale genome sequences

625492
sci-biology/diya broken since Perl 5.22 ( Can't use 'defined(@array)' )
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
David Seifert · gentoo
sci-biology/diya: Fix overlong DESCRIPTION
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3856
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed