{"bugs":[],"categories":[{"categoryid":452,"name":"dev-db","summary":"The dev-db category contains libraries and utilities for database related programming."},{"categoryid":393,"name":"dev-libs","summary":"The dev-libs category contains various miscellaneous programming libraries."},{"categoryid":438,"name":"media-libs","summary":"The media-libs category contains media-related libraries."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":381,"name":"sys-libs","summary":"The sys-libs category contains various system-level libraries."},{"categoryid":330,"name":"x11-libs","summary":"The x11-libs category contains various X11-related libraries."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"aa1603108b4e78bbdc257a31a0291d987717d1f9","committime":"2024-09-23T00:59:23","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"eschwartz@gentoo.org","authorname":"Eli Schwartz","body":"Upstream software has not released since 2013, stuck on CVS, with no\nsourceforge activity since 7 years ago when they deleted some spam.\n\nCloses: https:\/\/bugs.gentoo.org\/862261\nSigned-off-by: Eli Schwartz ","commitid":"c094eb705d0d4686fb07ce1804d60667d0f8cabc","committime":"2024-09-22T23:47:30","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: mark as LTO-unsafe"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"8256296f6742425e9c5a09628fba8c65ebc515b6","committime":"2022-02-13T23:36:42","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"46201b1c775d8c9a2b7b48306765cbfb7f98d0bf","committime":"2022-02-13T23:28:41","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: update EAPI 7 -> 8"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"9474a0e484088ec64a42084112b3fea472d2c673","committime":"2021-03-13T12:21:06","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-3.0.17, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"073a32677c3c9bfe01fde189671ecb675fe036d5","committime":"2021-03-13T12:09:50","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Port to EAPI 7"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e332bcf48978c21cd488743047c02d61bc77bcce","committime":"2020-11-01T19:05:14","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/706414\nPackage-Manager: Portage-3.0.8, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"083397d51c3f9bcbaf890477633ee33660e9155f","committime":"2020-11-01T18:36:05","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Fix -fno-common"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"dd32aaff0df9f2ce4eb2a3fd9d769a5e9c078bdc","committime":"2019-12-28T14:05:34","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ulm@gentoo.org","authorname":"Ulrich Müller","body":"Closes: https:\/\/bugs.gentoo.org\/702534\nPackage-Manager: Portage-2.3.84, Repoman-2.3.20\nSigned-off-by: Ulrich Müller ","commitid":"3756b8c634691f02848a75bb23cfc823dfab0ede","committime":"2019-12-28T13:55:49","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Change LICENSE to \"free-noncomm\"."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":44837,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e97b8c8ed5df03f1a539438e22e9ab351550f476","committime":"2017-02-19T19:02:03","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/3937","commitid":"2a37ce3b901ebfb75c56db7a11f45cd1999c80cb","committime":"2017-02-19T18:41:37","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Remove old"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: portage-2.3.1\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/3937","commitid":"b50bcafcec5e2627f0bffcf781313985e92cb24a","committime":"2017-02-19T18:41:34","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Port to emboss-r2.eclass"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e276789fbac1f63ee217f1146713347048bdbfe3","committime":"2017-02-06T21:38:43","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/3856","commitid":"00c7e2d1e6c26dad0da56080038b7805739ba8e2","committime":"2017-02-06T20:48:01","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Remove ppc from KEYWORDS"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"10f3170d7e5797d299afffa28b4f11a7dd75735f","committime":"2015-08-27T14:06:55","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Package-Manager: portage-2.2.20.1\nSigned-off-by: Justin Lecher ","commitid":"f5dedc5e945b517eaf67faf2fe9276587c41af2c","committime":"2015-08-27T13:28:50","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: Drop old"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e20efda9b0358439a3ebb411fc6e12b81fb8c927","committime":"2015-08-27T10:28:22","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"b484ac3164c477e76a8f656249934c01695afde6","committime":"2015-08-27T10:07:12","packageid":44837,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.2.20.1\nRepoMan-Options: --include-arches=\"x86\"","commitid":"162551a06c1199c68ee56d3702a4883b7976e7fc","committime":"2015-08-27T10:02:14","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: x86 stable wrt bug #558888"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.2.20.1\nRepoMan-Options: --include-arches=\"amd64\"","commitid":"70a0e9ad2cb4a6c0b2b843d3dee8d3f78b7d9b4d","committime":"2015-08-27T09:57:51","packageid":44837,"repoid":1,"summary":"sci-biology\/embassy-phylipnew: amd64 stable wrt bug #558888"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":44837,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":44837,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":44837,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":393,"description":"Stream-oriented XML parser library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"freedesktop-bugs@gentoo.org","maintainername":"Gentoo Freedesktop Project","name":"expat","packageid":44320},{"block":false,"categoryid":318,"description":"Multi-language scientific plotting library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"plplot","packageid":45584,"summary":"PLplot is a library of functions that are useful for making scientific plots. It can be used from within compiled languages such as C, C++, FORTRAN and Java, as well as interactively from interpreted languages such as Octave, Python, Perl and Tcl. It is capable of producing standard x-y plots, semilog plots, log-log plots, contour plots, 3D surface plots, mesh plots, bar charts and pie charts. Multiple graphs may be composited, and it also supports a large variety of output file devices such as Postscript, PNG, JPEG, LaTeX and others. It is also possible to to use interactive devices such as xwin, tk and xterm as output devices. PLplot also offers support for extended characters inculding the Greek alphabet and a host of mathematical symbols."},{"block":false,"categoryid":393,"description":"Perl-compatible regular expression library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"libpcre","packageid":46794},{"block":false,"categoryid":330,"description":"X.Org X Toolkit Intrinsics library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXt","packageid":47667},{"block":false,"categoryid":438,"description":"C\/C++ library for PDF generation","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"libharu","packageid":48308,"summary":"Haru PDF library is a ANSI\/C library for generating PDF files. It supports the following features: 1. Generating PDF files with lines, text, images. 2. Outline, text annotation, link annotation. 3. Compressing document with deflate-decode. 4. Embedding PNG, Jpeg images. 5. Embedding Type1 font and TrueType font. 6. Creating encrypted PDF files. 7. Using various character sets (ISO8859-1~16, MSCP1250~8, KOI8-R). 8. Supporting CJK fonts and encodings."},{"block":false,"categoryid":438,"description":"Graphics library for fast image creation","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"vapier@gentoo.org","maintainername":"Gentoo Graphics Project","name":"gd","packageid":53143,"summary":"gd is a graphics library. It allows your code to quickly draw images complete with lines, arcs, text, multiple colors, cut and paste from other images, and flood fills, and write out the result as a PNG or JPEG file. 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It is not necessary or desirable for gd to become a kitchen-sink graphics package, but version 2.0 does include most frequently requested features, including both truecolor and palette images, resampling (smooth resizing of truecolor images) and so forth."},{"block":false,"categoryid":353,"description":"The European Molecular Biology Open Software Suite - A sequence analysis package","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"emboss","packageid":54441,"summary":"EMBOSS is \"The European Molecular Biology Open Software Suite\". EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages."},{"block":false,"categoryid":381,"description":"Standard (de)compression library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"zlib","packageid":55408},{"block":false,"categoryid":452,"description":"PostgreSQL RDBMS","ebuildids":[740089],"firstseen":"2014-10-12T13:39:23.431369","maintainer":"pgsql-bugs@gentoo.org","maintainername":"PostgreSQL and Related Package Development","name":"postgresql","packageid":62608},{"block":false,"categoryid":452,"description":"C client library for MariaDB\/MySQL","ebuildids":[740089],"firstseen":"2015-07-18T13:39:36.291834","maintainer":"mysql-bugs@gentoo.org","maintainername":"MySQL","name":"mysql-connector-c","packageid":63873}],"depending":[{"block":false,"categoryid":353,"description":"A meta-package for installing all EMBASSY packages (EMBOSS add-ons)","ebuildids":[755460],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"embassy","packageid":47057}],"ebuilds":[{"archs":["~amd64","~x86","~x86-linux"],"ebuildid":740089,"firstseen":"2022-02-13T23:40:40.119438","license":"LGPL-2 GPL-2 free-noncomm","moddate":"2024-12-17T22:35:47","packageid":44837,"repoid":1,"slot":"0","uses":["X","mysql","pdf","png","postgres"],"version":"3.69.660-r1"}],"masks":[],"package":{"categoryid":353,"description":"EMBOSS integrated version of The Phylogeny Inference Package","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"embassy-phylipnew","packageid":44837},"rdependencies":[{"block":false,"categoryid":393,"description":"Stream-oriented XML parser library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"freedesktop-bugs@gentoo.org","maintainername":"Gentoo Freedesktop Project","name":"expat","packageid":44320},{"block":false,"categoryid":318,"description":"Multi-language scientific plotting library","ebuildids":[740089],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"plplot","packageid":45584,"summary":"PLplot is a library of functions that are useful for making scientific plots. 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