sci-biology / goby-cpp

A DNA sequencing data management framework - C/C++ API

Official package sites : http://campagnelab.org/software/goby/ ·

v2.0.1 :: 0 :: gentoo (Masked by set 3442)

Modified
License
GPL-3
Keywords
~amd64 ~x86
USE flags
static-libs

v1.9.8.1 :: 0 :: gentoo (Masked by set 3442)

Modified
License
GPL-3
Keywords
~amd64 ~x86

v1.9.7.3 :: 0 :: gentoo (Masked by set 3442)

Modified
License
GPL-3
Keywords
~amd64 ~x86

General

static-libs
Build static versions of dynamic libraries as well

app-portage / elt-patches : Collection of patches for libtool.eclass

dev-libs / libpcre : Perl-compatible regular expression library

dev-libs / protobuf : Google's Protocol Buffers - Extensible mechanism for serializing structured data

sys-devel / autoconf : Used to create autoconfiguration files

sys-devel / automake : Used to generate Makefile.in from Makefile.am

sys-devel / libtool : A shared library tool for developers

dev-libs / libpcre : Perl-compatible regular expression library

dev-libs / protobuf : Google's Protocol Buffers - Extensible mechanism for serializing structured data

595154
sci-biology/goby-cpp-2.0.1 : configure: error: Package requirements (libpcrecpp >= 8.10) were not met:
597050
sci-biology/goby-cpp-2.0.1 : /.../Alignments.cc:31:44: fatal error: google/.../gzip_stream.h: No such file or directory
660696
sci-biology/goby-cpp-2.0.1 : /.../ICBFileInputStream.h:156:31: error: scoped_array in namespace google::protobuf does not name a template type
668130
sci-biology/goby-cpp-1.9.8.1 : goby/Alignments.pb.h:17:2: error: #error This file was generated by an older version of protoc which is

3442
Michał Górny
sci-biology/goby has been removed. This package makes little sense without it. Removal in 30 days.
  • sci-biology/goby-cpp
Michał Górny · gentoo
sci-biology/goby-cpp: [QA] Move aux files to a distfile
Closes: https://bugs.gentoo.org/620614
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed