{"bugs":[{"bugid":836856,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/newick-utils-1.6-r1 fails tests on MUSL: FAIL: test_nw_gen.sh"},{"bugid":944181,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/newick-utils-1.6-r2 - [libtool] [gcc-15] display.c: error: too many arguments to function destroy_all_rnodes"}],"categories":[{"categoryid":442,"name":"dev-games","summary":"The dev-games category contains libraries and utilities relevant to games programming."},{"categoryid":393,"name":"dev-libs","summary":"The dev-libs category contains various miscellaneous programming libraries."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d8db3a35114b54fa0cffb64d2a649462c11ee1a3","committime":"2025-06-09T03:23:52","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"parona@protonmail.com","authorname":"Alfred Wingate","body":"Signed-off-by: Alfred Wingate \nPart-of: https:\/\/github.com\/gentoo\/gentoo\/pull\/41919\nSigned-off-by: Sam James ","commitid":"08ee8c97384b349612434eb836fe536af419329d","committime":"2025-05-03T16:52:47","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: add dev-libs\/libxml2 subslot op for incoming ABI break"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"0fa06f01576182a6babd6dd0eedd9ff0215f9e3a","committime":"2024-04-11T16:34:02","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Signed-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"02ca13e7809e1e15e3fd8529b3f6b11cad1b035b","committime":"2024-04-11T03:17:52","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: update EAPI 7 -> 8"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"The whole thing is a redirect now to a website with no real info, that\npoints to a github repo without even any tags.\n\nSigned-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"f3d0fd26ba50dd3df08387f1eede41f78427ec8f","committime":"2024-04-11T03:12:36","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: update HOMEPAGE, SRC_URI to archive.org"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Closes: https:\/\/bugs.gentoo.org\/862279\nSigned-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"9344d5beff1e1802dd14c2c40de973263aecce95","committime":"2024-04-11T03:09:20","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: mark as LTO-unsafe"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e332bcf48978c21cd488743047c02d61bc77bcce","committime":"2020-11-01T19:05:14","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"* Don't build static libraries by default\n* Fix GCC 10 \/ -fno-common\n* Disable automagic guile and lua\n\nCloses: https:\/\/bugs.gentoo.org\/708534\nCloses: https:\/\/bugs.gentoo.org\/712312\nCloses: https:\/\/bugs.gentoo.org\/727986\nPackage-Manager: Portage-3.0.8, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"f812704e44f3d927dd47f3901c59ee7716adefd0","committime":"2020-11-01T18:36:11","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: Port to EAPI 7"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":55866,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e276789fbac1f63ee217f1146713347048bdbfe3","committime":"2017-02-06T21:38:43","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/3856","commitid":"ab42ba35ed14c18f1cbadc1424d56b391c0c3e3f","committime":"2017-02-06T20:48:02","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: Remove old"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"d4c4be2ed97756c937831db623a79c198f2450e5","committime":"2016-01-21T09:01:59","packageid":55866,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Gentoo-Bug: 521644\n* Remove use of 'einstall'\n* EAPI=6\n\nPackage-Manager: portage-2.2.26","commitid":"ac414834093c3bfb137d7155a869650ea32d71ca","committime":"2016-01-21T08:39:45","packageid":55866,"repoid":1,"summary":"sci-biology\/newick-utils: Version bump to 1.6"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":55866,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":55866,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":55866,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":393,"description":"XML C parser and toolkit","ebuildids":[866730],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"gnome@gentoo.org","maintainername":"Gentoo GNOME Desktop","name":"libxml2","packageid":45251}],"depending":[{"block":true,"categoryid":442,"description":"Tools and libraries for NWN file manipulation","ebuildids":[825215,853519],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"games@gentoo.org","maintainername":"Gentoo Games Project","name":"libnw","packageid":52861,"summary":"libnw - libnw's aim is to provide platform-independent routines for the low- and mid-level manipulation of NWN resources, as members of game data files, modules, hak paks, export files, or stand alone. As a side effect, command-line programs are often produced to exercise portions of the library. Ultimately, these routines are intended to be assembled along with some form of GUI to make an equivalent to BioWare's Aurora Toolset. libnw is very much a work in progress, coded in C, and initially developed on ia32 hardware running GNU\/Linux. Members of the OK Project have assisted in porting the code to Mac OS X, as well."}],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":866730,"firstseen":"2025-06-09T04:42:56.602954","license":"BSD","moddate":"2026-03-22T20:20:57","packageid":55866,"repoid":1,"slot":"0","uses":["xml"],"version":"1.6-r3"}],"masks":[],"package":{"categoryid":353,"description":"Tools for processing phylogenetic trees","firstseen":"2010-06-06T14:35:26.247608","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"newick-utils","packageid":55866},"rdependencies":[{"block":false,"categoryid":393,"description":"XML C parser and toolkit","ebuildids":[866730],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"gnome@gentoo.org","maintainername":"Gentoo GNOME Desktop","name":"libxml2","packageid":45251},{"block":true,"categoryid":442,"description":"Tools and libraries for NWN file manipulation","ebuildids":[866730],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"games@gentoo.org","maintainername":"Gentoo Games Project","name":"libnw","packageid":52861,"summary":"libnw - libnw's aim is to provide platform-independent routines for the low- and mid-level manipulation of NWN resources, as members of game data files, modules, hak paks, export files, or stand alone. As a side effect, command-line programs are often produced to exercise portions of the library. Ultimately, these routines are intended to be assembled along with some form of GUI to make an equivalent to BioWare's Aurora Toolset. libnw is very much a work in progress, coded in C, and initially developed on ia32 hardware running GNU\/Linux. Members of the OK Project have assisted in porting the code to Mac OS X, as well."}],"repos":[{"branch":"master","lastcommit":"52197549fd3431fa256b8edbafdcd3702dd0e134","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/web.archive.org\/web\/20120206012743\/http:\/\/cegg.unige.ch\/newick_utils"],"uses":[{"description":"Uses dev-libs\/libxml2 to handle ornaments","isdefault":false,"packageid":55866,"use":"xml"}]}