{"bugs":[{"bugid":941996,"firstseen":"2024-10-23T09:03:21.475756","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/raxml-8.2.13 fails to compile: evaluatePartialGenericSpecial.c:110:9: error: unknown type name __m128d"},{"bugid":944195,"firstseen":"2024-11-20T19:04:10.072793","severity":"normal","status":"CONFIRMED","summary":"sci-biology\/raxml-8.2.13 - [ncurses-6.5] [gcc-15] rmq.h: error: two or more data types in declaration specifiers"}],"categories":[{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"02e5e751049cd4311fd9db8c4d4647800e60b609","committime":"2024-05-24T09:03:45","packageid":53028,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/822408\nCloses: https:\/\/bugs.gentoo.org\/831489\nSigned-off-by: David Seifert ","commitid":"ccce71a38571bf752f650f36417cb50fb69edaa8","committime":"2024-05-24T08:44:40","packageid":53028,"repoid":1,"summary":"sci-biology\/raxml: drop 7.2.6"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Bug: https:\/\/bugs.gentoo.org\/822408\nBug: https:\/\/bugs.gentoo.org\/831489\nSigned-off-by: David Seifert ","commitid":"48c3969c6bbd4c14e06285180baf5ca376114835","committime":"2024-05-24T08:44:39","packageid":53028,"repoid":1,"summary":"sci-biology\/raxml: add 8.2.13"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3a4caf812f3d4f9f854838fb0fb640311a31cc32","committime":"2021-04-05T14:34:55","packageid":53028,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-3.0.18, Repoman-3.0.3\nSigned-off-by: David Seifert ","commitid":"d3bc203ff48c69ad14e9b659c8d9c3c9d6d85bff","committime":"2021-04-05T14:14:38","packageid":53028,"repoid":1,"summary":"sci-biology\/raxml: Port to EAPI 7"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":53028,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":53028,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":53028,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":53028,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":53028,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[],"depending":[],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":827636,"firstseen":"2024-05-24T10:23:34.593305","license":"GPL-2","moddate":"2024-12-17T22:35:47","packageid":53028,"repoid":1,"slot":"0","uses":["cpu_flags_x86_sse3","threads"],"version":"8.2.13"}],"masks":[],"package":{"categoryid":353,"description":"Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"raxml","packageid":53028},"rdependencies":[],"repos":[{"branch":"master","lastcommit":"cf3413aa6cdc7aa45647436057d52f2dff206e41","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/github.com\/stamatak\/standard-RAxML"],"uses":[{"defaultflag":true,"description":"Add threads support for various packages. Usually pthreads","isdefault":true,"use":"threads"},{"description":"Use the SSE3 instruction set ([pni] in cpuinfo, NOT ssse3)","group":"cpu_flags_x86","isdefault":false,"use":"sse3"}]}