sci-biology / seaview

A graphical multiple sequence alignment editor

Official package sites : http://pbil.univ-lyon1.fr/software/seaview.html ·

SeaView is a graphical multiple sequence alignment editor developped by Manolo Gouy. SeaView is able to read and write various alignment formats (NEXUS, MSF, CLUSTAL, FASTA, PHYLIP, MASE). It allows to manually edit the alignment, and also to run DOT-PLOT or CLUSTALW programs to locally improve the alignment.

v4.6 :: 0 :: gentoo

Modified
License
public-domain
Keywords
~amd64 ~x86
USE flags
xft

v4.5.4 :: 0 :: gentoo

Modified
License
public-domain
Keywords
amd64 x86
USE flags
xft

v4.3.5 :: 0 :: gentoo

Modified
License
public-domain
Keywords
amd64 x86
USE flags
xft

General

xft
Build with support for XFT font renderer (x11-libs/libXft)

sci-biology / clustalw : General purpose multiple alignment program for DNA and proteins

sci-biology / muscle : Multiple sequence comparison by log-expectation

sci-biology / phyml : Estimation of large phylogenies by maximum likelihood

sci-libs / libmuscle : Library for sci-biology/mauve

sys-libs / zlib : Standard (de)compression library

virtual / pkgconfig : Virtual for the pkg-config implementation

x11-libs / fltk : C++ user interface toolkit for X and OpenGL

x11-libs / libX11 : X.Org X11 library

x11-libs / libXft : X.Org Xft library

sci-biology / clustalw : General purpose multiple alignment program for DNA and proteins

sci-biology / muscle : Multiple sequence comparison by log-expectation

sci-biology / phyml : Estimation of large phylogenies by maximum likelihood

sci-libs / libmuscle : Library for sci-biology/mauve

sys-libs / zlib : Standard (de)compression library

x11-libs / fltk : C++ user interface toolkit for X and OpenGL

x11-libs / libX11 : X.Org X11 library

x11-libs / libXft : X.Org Xft library

588506
sci-biology/seaview-4.5.4 - treedraw.cxx:3099:43: error: ‘class tree_panel’ has no member named ‘top_window’
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
David Seifert · gentoo
sci-biology/seaview: Remove ppc from KEYWORDS
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3856
David Seifert · gentoo
sci-biology/seaview: version bump
* EAPI=6 Package-Manager: portage-2.3.0
Agostino Sarubbo · gentoo
sci-biology/seaview: ppc stable wrt bug #575914
Package-Manager: portage-2.2.26 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Agostino Sarubbo · gentoo
sci-biology/seaview: x86 stable wrt bug #575914
Package-Manager: portage-2.2.26 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Ian Delaney · gentoo
Merge remote-tracking branch 'remotes/sbraz/syncthing'
Pull Request: https://github.com/gentoo/gentoo/pull/990
Agostino Sarubbo · gentoo
sci-biology/seaview: amd64 stable wrt bug #575914
Package-Manager: portage-2.2.26 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
Justin Lecher · gentoo
sci-biology/seaview: Version Bump
fixes compilation problems with newer fltk Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=556750 Package-Manager: portage-2.2.25 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed