{"bugs":[],"categories":[{"categoryid":450,"name":"dev-lang","summary":"The dev-lang category contains various programming language implementations and related tools."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"dcfd868ba8c7a2e30b77e8504d1545e862c14dd7","committime":"2022-10-19T09:31:44","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ionen@gentoo.org","authorname":"Ionen Wolkens","body":"Closes: https:\/\/bugs.gentoo.org\/874477\nSigned-off-by: Ionen Wolkens ","commitid":"ec69f56bc3a7550b3c5018017b762e109ff19e5a","committime":"2022-10-19T08:57:37","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: fix build w\/ clang16, pass -std=gnu89"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"793c295fa29b372493043b1478ae2a42b76902cd","committime":"2022-07-09T10:01:55","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"01ccd8f6eb167dedd81a5ba3a3282f9e36893c4b","committime":"2022-07-09T09:53:58","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: drop 1.31"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"911c75e69d537dd9384a29f76a57fe9af143f13e","committime":"2022-07-09T09:53:57","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: improve makefile"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"4b0fa854d5b233d496284bfff3fb2c6092d283e6","committime":"2022-07-02T23:46:27","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Closes: https:\/\/bugs.gentoo.org\/710970\nSigned-off-by: Sam James ","commitid":"24345bb7834073b0027c28b890a36ed5ffd35a12","committime":"2022-07-02T23:38:32","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: update EAPI 6 -> 8"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"4c499be743329f6638cdc459cf1fed8a0bccca1b","committime":"2017-04-29T19:02:13","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Package-Manager: Portage-2.3.5, Repoman-2.3.2\nSigned-off-by: Justin Lecher ","commitid":"529e06ea7c5927e07c85bd485067b32842ad14ad","committime":"2017-04-29T18:35:40","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: Drop old"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"f9a57c18d7147d2b075c3c02479db8a353789405","committime":"2017-04-27T10:42:51","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo ","commitid":"f46a9e9cb9c84b7a1351123be5c8d494c540b561","committime":"2017-04-27T10:19:55","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: x86 stable wrt bug #615564"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"27ac491385a52afd05d9494cff806e1652bc7763","committime":"2017-04-23T10:41:56","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo ","commitid":"5b001c890fdc9192c2fbe7598cdc71d63540d01b","committime":"2017-04-23T10:19:16","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: amd64 stable wrt bug #615564"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"c7aac814c6fed0955bcc883de8e3a8c9ce71e1e4","committime":"2017-04-14T19:01:52","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Package-Manager: Portage-2.3.5, Repoman-2.3.2\nSigned-off-by: Justin Lecher ","commitid":"196ce403dba6344ab0a3924ffad33799657e8103","committime":"2017-04-14T18:07:20","packageid":49297,"repoid":1,"summary":"sci-biology\/trnascan-se: Bump EAPI to 6"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":49297,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":49297,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":49297,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":49297,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":49297,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[],"depending":[],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":765697,"firstseen":"2022-10-19T10:37:18.050812","license":"GPL-2","moddate":"2024-12-17T22:35:47","packageid":49297,"repoid":1,"slot":"0","uses":[],"version":"1.31-r3"}],"masks":[],"package":{"categoryid":353,"description":"tRNA detection in large-scale genome sequences","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"trnascan-se","packageid":49297,"summary":"tRNAscan-SE detects ~99% of eukaryotic nuclear or prokaryotic tRNA genes, with a false positive rate of less than one per 15 gigabases, and with a search speed of about 30 kb\/second. It was implemented for large-scale human genome sequence analysis, but is applicable to other DNAs as well."},"rdependencies":[{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[765697],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582}],"repos":[{"branch":"master","lastcommit":"9eec97a1e0965fefa0c4b44c94f1139bd1bf90be","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["http:\/\/lowelab.ucsc.edu\/tRNAscan-SE\/"],"uses":[]}