sci-biology / vcftools

Tools for working with VCF (Variant Call Format) files

Official package sites : http://vcftools.sourceforge.net/ ·

v0.1.16 :: 0 :: gentoo

Modified
License
LGPL-3
Keywords
~amd64 ~x86
USE flags
lapack

General

lapack
Add support for the virtual/lapack numerical library

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

sys-libs / zlib : Standard (de)compression library

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

dev-lang / perl : Larry Wall's Practical Extraction and Report Language

sys-libs / zlib : Standard (de)compression library

virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation

941490
sci-biology/vcftools-0.1.16 - [libtool] [llvm] variant_file_filters.cpp: error: use of undeclared identifier random_shuffle
Repository mirror & CI · gentoo
Merge updates from master
Sam James · gentoo
sci-biology/vcftools: drop 0.1.14
Signed-off-by: Sam James <sam@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Andrew Ammerlaan · gentoo
sci-biology/vcftools: add version 0.1.16
Closes: https://bugs.gentoo.org/833503 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Repository mirror & CI · gentoo
Merge updates from master
Michał Górny · gentoo
sci-biology/vcftools: Sort KEYWORDS
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
David Seifert · gentoo
sci-biology/vcftools: Add missing RDEPEND on sys-libs/zlib
Package-Manager: portage-2.3.1
David Seifert · gentoo
sci-biology/vcftools: Remove old ebuild
Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/2407 Signed-off-by: David Seifert <soap@gentoo.org>
David Seifert · gentoo
sci-biology/vcftools: Version bump to 0.1.14
Gentoo-bug: 594924 * EAPI=6 * Properly RDEPEND on dev-lang/perl Package-Manager: portage-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/2407 Signed-off-by: David Seifert <soap@gentoo.org>
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed