sci-biology / wise

Intelligent algorithms for DNA searches

Official package sites : ·

v2.4.0_alpha-r1 :: 0 :: gentoo

~amd64 ~x86
USE flags


Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally

sci-biology / hmmer : Sequence analysis using profile hidden Markov models

sci-biology / hmmer : Sequence analysis using profile hidden Markov models

sci-biology/wise-2.4.0_alpha will not build with USE doc
sci-biology/wise Please set VARTEXFONTS=${T}/fonts to prevent sandbox violations
sci-biology/wise-2.4.0_alpha-r1 does not respect LDFLAGS
sci-biology/wise-2.4.0_alpha-r1 calls ar directly
sci-biology/wise-2.4.0_alpha-r1 - ! LaTeX Error: Bad math environment delimiter.
sci-biology/wise-2.4.0_alpha-r1 - int (const char , const char ); ISO C99 and later do not support
sci-biology/wise-2.4.0_alpha-r1 fails to compile (CLANG-STRICTER-SYSTEM): compressed_protein_index.dy:223:10: error: incompatible pointer to integer conversion returning void from a function with result type boolean (aka int) [-Wint-conversion]
Repository mirror & CI · gentoo
Merge updates from master
Jakov Smolic · gentoo
sci-biology/wise: Port to EAPI 8
Signed-off-by: Jakov Smolic <> Signed-off-by: David Seifert <>
Repository mirror & CI · gentoo
Merge updates from master
Sam James · gentoo
sci-biology/wise: eutils->epatch
Package-Manager: Portage-3.0.14-prefix, Repoman-3.0.2 Signed-off-by: Sam James <>
Michał Górny · gentoo
sci-biology/wise: Move patches to a distfile
Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <>
David Seifert · gentoo
sci-biology/wise: Remove alpha ia64 sparc from KEYWORDS
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes:
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <> X-Thanks: Alec Warner <> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <> - validation scripts X-Thanks: Patrick Lauer <> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed