sci-chemistry / p3d

Python module for structural bioinformatics

Official package sites : http://p3d.fufezan.net/ ·

p3d was developed in order to offer a Python module that is powerful and fast, yet intuitive to use. The simplicity of p3d is due to the usage of object oriented programming (i.e. atoms are treated as vectors), the implementation of a query parser that translates queries readable by humans into a combination of algebra set operations the fact that no additional Python packages are necessary. The speed is due to the usage of a binary space partitioning (BSP) tree which allows very fast queries in 3D (Henry et al. 1980). The additional synergy is obtained by the flexible combination of both speed and complexity in the queries to the structural data. The combination of these factors makes p3d the optimal module to rapidly develop new and powerful bioinformatic tools that follow the Python philosophy of making the source code readable.

v9999 :: 0 :: gentoo

Modified
License
GPL-3
USE flags
examples

v0.4.3-r1 :: 0 :: gentoo

Modified
License
GPL-3
Keywords
~amd64 ~amd64-linux ~x86 ~x86-linux
USE flags
examples

General

examples
Install examples, usually source code

python_targets

python2_7
Build with Python 2.7

dev-lang / python : An interpreted, interactive, object-oriented programming language

dev-lang / python-exec : Python script wrapper

dev-vcs / git : stupid content tracker: distributed VCS designed for speed and efficiency

dev-lang / python : An interpreted, interactive, object-oriented programming language

dev-lang / python-exec : Python script wrapper

Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
Michał Górny · gentoo
sci-chemistry/p3d: distutils-r1, git-r3, EAPI=6
Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed