{"bugs":[],"categories":[{"categoryid":416,"name":"sci-chemistry","summary":"The sci-chemistry category contains software that can be used in chemistral scientific environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a198e862478387fe37b4d232d51a3edb558cd3e0","committime":"2025-12-19T10:01:01","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Bug: https:\/\/bugs.gentoo.org\/473598\nBug: https:\/\/bugs.gentoo.org\/720224\nSigned-off-by: Fabian Groffen ","commitid":"2d25fad95cbaa525c8945d8e582c749d49524f49","committime":"2025-12-19T09:25:43","packageid":46267,"repoid":1,"summary":"*\/*: drop *-linux keywords"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f2979793991144637956e4225ce4d0235900c1a2","committime":"2023-06-09T15:16:56","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"arthurzam@gentoo.org","authorname":"Arthur Zamarin","body":"Signed-off-by: Arthur Zamarin ","commitid":"06ce5cc858cbbe7a36bfb9f0b7e137011268ba2b","committime":"2023-06-03T14:47:58","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: destabilize for ~x86"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"39da18b49f0f1c5486a1cddc64d32bac28abc59b","committime":"2021-11-19T00:07:44","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"gyakovlev@gentoo.org","authorname":"Georgy Yakovlev","body":"Bug: https:\/\/bugs.gentoo.org\/823768\nSigned-off-by: Georgy Yakovlev ","commitid":"eca1908452b3d4c87f90c3e782692743c3f6537b","committime":"2021-11-18T23:45:08","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: de-stabilize for ~ppc, bug #823768"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e09fb731e1e423680e7686c41224fdce5e996fa7","committime":"2021-01-06T15:35:03","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Package-Manager: Portage-3.0.12, Repoman-3.0.2\nSigned-off-by: Fabian Groffen ","commitid":"e8725126201fc8fea7e964e4ed73b07aa8469f81","committime":"2021-01-06T15:09:46","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: drop x86-macos"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e444778d0f924c05902d50e251ecd372d53c0211","committime":"2020-09-16T21:35:20","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Closes: https:\/\/bugs.gentoo.org\/742014\nPackage-Manager: Portage-3.0.7, Repoman-3.0.1\nSigned-off-by: David Seifert ","commitid":"ceffd0224a4d3de3d60d87b812d1d603846ae16a","committime":"2020-09-16T20:59:33","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: Port to EAPI 7"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":46267,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"9e1997303d5b9b2a0520075478d5ae4cd46a650e","committime":"2015-09-20T11:01:42","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"obsoletes\nGentoo-Bug: https:\/\/bugs.gentoo.org\/show_bug.cgi?id=556806\n\nPackage-Manager: portage-2.2.20.1\nSigned-off-by: Justin Lecher ","commitid":"8cc7f9a89b3eb03af30f812cfc393f43949e6c5e","committime":"2015-09-20T10:39:08","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: Drop old"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"2d326143365a1dceb1b3ae98baecd845b7d12d7d","committime":"2015-09-20T09:41:54","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.2.20.1\nRepoMan-Options: --include-arches=\"x86\"","commitid":"c2813240c0a486eda149c5e5ebfeefb5e6bb0cc8","committime":"2015-09-20T09:21:49","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: x86 stable wrt bug #556816"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"48e66340b4985a4d6b6b1e95e0bc864572d13cbd","committime":"2015-09-06T13:47:23","packageid":46267,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.2.20.1\nRepoMan-Options: --include-arches=\"ppc\"","commitid":"89606961a74630925beca358687453e32b5c68aa","committime":"2015-09-06T13:24:21","packageid":46267,"repoid":1,"summary":"sci-chemistry\/probe: ppc stable wrt bug #556816"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":46267,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":46267,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"45b162296c83d00ea3fd00f20ce1cbc99bac43e1","committime":"2015-08-06T13:22:21","packageid":46267,"repoid":1,"summary":"2015-08-06 13:22:20 UTC"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":46267,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[],"depending":[{"block":false,"categoryid":416,"description":"Build lists of van der Waals clashes from an input PDB file","ebuildids":[457006,457006],"firstseen":"2010-07-19T14:36:00.880923","maintainer":"sci-chemistry@gentoo.org","maintainername":"Gentoo Chemistry Project","name":"clashlist","packageid":56069,"summary":"Clashlist is a simple UNIX script which uses the awk facility along with the programs Probe and Cluster to build lists of van der Waals clashes from an input PDB-format molecular data file (with H atoms). These lists are organized such that collections of interacting residues are grouped together, sorted by the worst clash. For the purposes of this analysis, a clash is defined as a van der Waals overlap >= 0.4 A."}],"ebuilds":[{"archs":["amd64","~ppc","~x64-macos","~x86"],"ebuildid":456848,"firstseen":"2012-06-06T14:37:04.653043","license":"richardson","moddate":"2026-03-22T20:20:57","packageid":46267,"repoid":1,"slot":"0","uses":[],"version":"2.13.110909"}],"masks":[],"package":{"categoryid":416,"description":"Evaluates atomic packing within or between molecules","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-chemistry@gentoo.org","maintainername":"Gentoo Chemistry Project","name":"probe","packageid":46267},"rdependencies":[],"repos":[{"branch":"master","lastcommit":"52197549fd3431fa256b8edbafdcd3702dd0e134","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["http:\/\/kinemage.biochem.duke.edu\/software\/probe.php"],"uses":[]}