{"bugs":[{"bugid":836096,"firstseen":"2022-03-26T04:01:13.448062","severity":"normal","status":"CONFIRMED","summary":"sci-chemistry\/vmd: uses variables banned in scope (VariableScope)"},{"bugid":947213,"firstseen":"2024-12-30T12:58:52.976772","severity":"normal","status":"UNCONFIRMED","summary":"sci-chemistry\/vmd-1.9.4_alpha57-r3 fails to build because of API changes in x11-libs\/fltk-1.4.1"}],"categories":[{"categoryid":452,"name":"dev-db","summary":"The dev-db category contains libraries and utilities for database related programming."},{"categoryid":450,"name":"dev-lang","summary":"The dev-lang category contains various programming language implementations and related tools."},{"categoryid":393,"name":"dev-libs","summary":"The dev-libs category contains various miscellaneous programming libraries."},{"categoryid":336,"name":"dev-python","summary":"The dev-python category contains packages whose primary purpose is to provide Python modules, extensions and bindings, as well as tools and utilities useful for development in the Python programming language."},{"categoryid":428,"name":"dev-util","summary":"The dev-util category contains various miscellaneous development utilities."},{"categoryid":354,"name":"media-gfx","summary":"The media-gfx category contains graphics-related packages."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":416,"name":"sci-chemistry","summary":"The sci-chemistry category contains software that can be used in chemistral scientific environments."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."},{"categoryid":330,"name":"x11-libs","summary":"The x11-libs category contains various X11-related libraries."},{"categoryid":382,"name":"x11-misc","summary":"The x11-misc category contains miscellaneous X11 applications which do not belong elsewhere."},{"categoryid":349,"name":"x11-terms","summary":"The x11-terms category contains terminal emulators for X11 environments."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"cb5e13e885c4e26f03bd44b963bc4087aabf65f5","committime":"2024-12-26T18:05:24","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ionen@gentoo.org","authorname":"Ionen Wolkens","body":"Also cleanup lower bound, 1.1 is extremely ancient.\n\nUntested with fltk-1.4 given have not bothered getting the\nfetch restricted distfile. If there's any issues, note that\nfixes are typically easy (often IWYU missing headers or\nmisnamed headers that relied on compat symlinks) and should\navoid a upper bound if possible.\n\nSigned-off-by: Ionen Wolkens ","commitid":"fc5107437cc612cada0a3222a250d19375f11ea0","committime":"2024-12-26T08:41:42","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: add binding := to fltk, soname changed"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"4fa8285d43e17672e7b59de4cfff87245c119caf","committime":"2024-07-11T11:48:55","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Ebuild forcing linking flags break some utils, point to new location for\nnumpy2 include files\n\nCloses: https:\/\/bugs.gentoo.org\/929763\nThanks-to: he.ousia\nCloses: https:\/\/bugs.gentoo.org\/835604\nThanks-to: Hypoon\nSigned-off-by: Pacho Ramos ","commitid":"8762ad972d826ad2be59344e68b67b1bbfefe760","committime":"2024-07-11T11:39:53","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Fix compat with numpy-2 and don't mess with linking"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"50d132934d2504fedbdeec69c1e3c9523b54e2e4","committime":"2024-06-05T17:48:59","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"alexxy@gentoo.org","authorname":"Alexey Shvetsov","body":"Signed-off-by: Alexey Shvetsov ","commitid":"435b1efde5f64e20abd52bfe53f3636c4088bce6","committime":"2024-06-05T17:27:32","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: enable py3.12"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d30561b24beaf60bde4cd8c1968bd590bed93fb8","committime":"2023-05-02T18:48:06","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Signed-off-by: Pacho Ramos ","commitid":"126bd93d9cd0e5087c57feb1d5ab36ee097cd4f3","committime":"2023-05-02T18:35:07","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: flag-o_matic.eclass is not used"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Closes: https:\/\/bugs.gentoo.org\/897204\nSigned-off-by: Pacho Ramos ","commitid":"9e05d8b3c631e019d8b69db903c82ab881cce403","committime":"2023-05-02T18:33:51","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: enable py3.11"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"8d0ebee607de5c63d747980fbeb0806c193a29c9","committime":"2023-01-14T13:02:17","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"ed468028e725c9580a7b2ee02d6b7b9375f7a0b2","committime":"2023-01-14T12:51:19","packageid":48144,"repoid":1,"summary":"*\/*: remove py3.8 from PYTHON_COMPAT"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"4f7eb691f3a212e49e23028e62661f91b1164dff","committime":"2022-10-15T23:33:52","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"374f6ec5091a7208d1d75948caa7a18c7b1dca54","committime":"2022-10-15T15:35:32","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: drop 1.9.4_alpha55"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"58f39709897aea7b5213126d037d2295f9505831","committime":"2022-05-20T19:48:17","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Signed-off-by: Pacho Ramos ","commitid":"0b747add2f74c816412a868cbf82ac1f4f2eb92e","committime":"2022-05-20T19:28:19","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: drop 1.9.4_alpha51"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Signed-off-by: Pacho Ramos ","commitid":"7d374e6585c28845b4370683b4eb3ad266436b60","committime":"2022-05-20T19:28:06","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: add 1.9.4_alpha57"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d1aab7aab396360f740fd0e9b04a8b0008c2ffac","committime":"2021-11-11T11:21:20","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-3.0.28, Repoman-3.0.3\nSigned-off-by: Pacho Ramos ","commitid":"dd5c2486af46f8cd775a04a2b3364e504fed3dc0","committime":"2021-11-11T11:02:24","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Bump to alpha55"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"81ea93ee3abaa45450db8d93c33d45bd29ad4053","committime":"2021-07-17T18:36:25","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"c714f344e741fe2cd5b0df810cf3c20abfea6377","committime":"2021-07-17T18:17:00","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: PYTHON_MULTI_USEDEP -> PYTHON_USEDEP"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"dfb4508c2cb7453cde4ffbecbfe9401e67ebf086","committime":"2021-05-02T19:35:04","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-3.0.18, Repoman-3.0.3\nSigned-off-by: Pacho Ramos ","commitid":"8c9499c1d811547d4d69f60d5b78ae7edacdd922","committime":"2021-05-02T19:22:03","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Drop old"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"7b31ec83f62a0b76de2b22a422bfc303043b0113","committime":"2021-02-12T12:52:38","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Also stop pushing people to play with tar vs tar.gz file as most web\nbrowsers properly download tar.gz file at present time, bug #640440\n\nCloses: https:\/\/bugs.gentoo.org\/640440\nPackage-Manager: Portage-3.0.14, Repoman-3.0.2\nSigned-off-by: Pacho Ramos ","commitid":"3b1941d5039ebc6b665882de5bca60934b366814","committime":"2021-02-12T12:30:59","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Bump to 1.9.4_alpha51"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"2c6c2efe4c1a02689bcd5e6e58a54035dec44025","committime":"2021-01-31T02:18:05","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Signed-off-by: Michał Górny ","commitid":"d8cbaa62dbf4abc31cc74d2cc12e3d0c7ac9b70a","committime":"2021-01-30T23:36:06","packageid":48144,"repoid":1,"summary":"*\/*: Remove obsolete values from PYTHON_COMPAT"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3fccbb9cf0ab232ae624f04ad349dbcf30d49ba9","committime":"2020-12-06T17:35:24","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-3.0.11, Repoman-3.0.2\nSigned-off-by: Pacho Ramos ","commitid":"40cc1efe632ae9c6fb0a5d165b87a76bf133a1dd","committime":"2020-12-06T17:19:36","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Update fetch restriction message"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"64dfca9a9968a09791069a00384ae379691d748c","committime":"2020-11-15T16:05:25","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"juippis@gentoo.org","authorname":"Joonas Niilola","body":"Closes: https:\/\/bugs.gentoo.org\/748210\nSigned-off-by: Joonas Niilola ","commitid":"4cff8d78afd97a9c1763c773b95e8a18b225d85e","committime":"2020-11-15T14:05:28","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: fix SizeViolation issue"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d1b5d140c3e50ed7a7f3327afbe2ecd61ec84af7","committime":"2020-09-24T15:05:18","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Adapt patch to 1.9.4\n\nCloses: https:\/\/bugs.gentoo.org\/741978\nThanks-to: Hypoon\nPackage-Manager: Portage-3.0.7, Repoman-3.0.1\nSigned-off-by: Pacho Ramos ","commitid":"2176533fcbc07aabe6a5c9a45e6bb1e499773592","committime":"2020-09-24T14:46:15","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Apply fixes to plugins"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"ae963b39d9caeee3b6ea40212b1fa794047f1d3a","committime":"2020-09-19T12:35:15","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Signed-off-by: Michał Górny ","commitid":"644a181b8ab3d796f3a489edc77bf21be545e05f","committime":"2020-09-19T11:49:58","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Remove old"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"565fe86146bd6e5d51a5dd15d02606a6789e3b93","committime":"2020-09-17T21:10:16","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Bug: https:\/\/bugs.gentoo.org\/show_bug.cgi?id=741978\nPackage-Manager: Portage-3.0.7, Repoman-3.0.1\nSigned-off-by: Pacho Ramos ","commitid":"2b8ca2477464d99ddabb7c1da6df8138d44917e7","committime":"2020-09-17T20:58:33","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Allow to apply user patches in plugins"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"88e33661714b22f8a6bb0fcd906072b5c6864906","committime":"2020-09-12T23:05:19","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Bug: https:\/\/bugs.gentoo.org\/735462\nPackage-Manager: Portage-3.0.6, Repoman-3.0.1\nSigned-off-by: Pacho Ramos ","commitid":"83ad69352b99be7362c95935706182b66fca3df4","committime":"2020-09-12T22:31:29","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Fix pkg_nofetch message"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"322217e9299396f8dda7e8866ee6e264b04e8829","committime":"2020-09-09T17:35:14","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Bug: https:\/\/bugs.gentoo.org\/735462\nPackage-Manager: Portage-3.0.4, Repoman-3.0.1\nSigned-off-by: Pacho Ramos ","commitid":"8790988057a312f5e5cfa1d6f0acf4c681619321","committime":"2020-09-09T17:03:02","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Bump to 1.9.4_alpha43"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"4bffd1d81d5af2f431952e64500ffd0c8b23ba97","committime":"2020-07-21T10:05:13","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-3.0.0, Repoman-2.3.23\nSigned-off-by: Pacho Ramos ","commitid":"ca543cde3fd9c01494d9f33fe40c55b16d98a91f","committime":"2020-07-21T09:54:29","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Drop old"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"0a4a7af65f2ea74b97cc732d9dc6b61b5c8e92ea","committime":"2020-03-08T19:06:30","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-2.3.93, Repoman-2.3.20\nSigned-off-by: Pacho Ramos ","commitid":"805bb1f57777f38626dad04b06629c0ef515c3a2","committime":"2020-03-08T18:46:56","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Fix support for current CUDA versions"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"07af4f23e380253ca997a7779660947173e0aa07","committime":"2020-02-09T17:30:17","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Signed-off-by: Michał Górny ","commitid":"8ba9e5b982ef7fd97b46b4b0f20c93ea71f6c103","committime":"2020-02-07T18:01:42","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Switch to PYTHON_MULTI_USEDEP API"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"55f1440d882a720eaea1624b4ff8b77a4d9244f9","committime":"2020-01-22T22:25:38","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Signed-off-by: Michał Górny ","commitid":"787aa04ebb58d6e4f06e8b49890d022d6e06ff2b","committime":"2020-01-22T21:43:32","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Revbump post dep change"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3de1592ab7701d0e90b6c93fee7aa277928b8210","committime":"2020-01-16T06:45:47","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Signed-off-by: Michał Górny ","commitid":"2ea12cd580ee77a8b6571ecb80b6ac2481904a2d","committime":"2020-01-16T06:28:38","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Permit numpy-python2"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"b0f11dcfd85bfcfbad1d60d097ff7b8166ef54af","committime":"2019-12-15T15:45:37","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-2.3.81, Repoman-2.3.19\nSigned-off-by: Pacho Ramos ","commitid":"4c03ac229acd7c3f5fd7aa110148ac5172268d4e","committime":"2019-12-15T15:31:06","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Fix \/tmp PATH, open .pdb files as pymol does"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"77c1dd6836a1d0867c3cb058d3c4fd314c6843ba","committime":"2019-05-30T11:26:07","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-2.3.66, Repoman-2.3.12\nSigned-off-by: Pacho Ramos ","commitid":"17886825b13dd8039f5b8abaed7f52a329d8f334","committime":"2019-05-30T11:15:23","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Make repoman more happy"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"- Longer explanation to download sources files (#640440)\n- Fix tachyon support (#644122)\n- Install netcdf plugin (#661636)\n\nBug: https:\/\/bugs.gentoo.org\/640440\nCloses: https:\/\/bugs.gentoo.org\/644122\nCloses: https:\/\/bugs.gentoo.org\/661636\nPackage-Manager: Portage-2.3.66, Repoman-2.3.12\nSigned-off-by: Pacho Ramos ","commitid":"3e2a2a3baebbc26bdcd1ee23a765bf04ebed7ee3","committime":"2019-05-30T11:14:56","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Multiple fixes and update ebuild"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a91648eb3e2e8f71832b550ff8894b19cbfc9298","committime":"2019-02-04T22:03:55","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"bkohler@gentoo.org","authorname":"Ben Kohler","body":"Closes: https:\/\/bugs.gentoo.org\/663224\nPackage-Manager: Portage-2.3.59, Repoman-2.3.12\nSigned-off-by: Ben Kohler ","commitid":"c0e8a7d550dbb94fa1dc74bfe31cad0051860cff","committime":"2019-02-04T21:43:41","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: don't reference ${DISTDIR} in pkg_nofetch"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"98b58b55c8becba595698f2059c96d1c5f9689ab","committime":"2018-11-10T11:24:04","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Signed-off-by: Pacho Ramos \nPackage-Manager: Portage-2.3.51, Repoman-2.3.11","commitid":"7bcb5fd26701788546a1ab3c6e71d7683652d330","committime":"2018-11-10T10:45:27","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Needs to be rebuilt with gromacs updates"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"bbdc0cb6ede4da386a8dfb0fab63ef1ab4a67a9f","committime":"2017-12-08T14:51:14","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"alexxy@omrb.pnpi.spb.ru","authorname":"Alexey Shvetsov","body":"Package-Manager: Portage-2.3.16, Repoman-2.3.6","commitid":"446a9f633b7faf69bf1c6b8624f8f2e965b7dc74","committime":"2017-12-08T14:37:27","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Version bump"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"221fd86adb4df2ca5ca562929f4bed1b848fba55","committime":"2017-04-20T17:02:07","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.5, Repoman-2.3.2","commitid":"a5d3e1fa4844ce74fa45c53c483bd7b3126de776","committime":"2017-04-20T15:10:40","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: [QA] Add missing python metadata variables"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":48144,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"malfatti@neuro.ufrn.br","authorname":"T. Malfatti","commitid":"8457ba6f9fd6f0dbafcca1fb375788eeea02aae1","committime":"2017-01-26T18:44:34","packageid":48144,"repoid":1,"summary":"media-libs\/portaudio: Version bump"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"15de9f67386f42448e7e0cdf8cea1786c1a7e31a","committime":"2016-12-28T12:03:01","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"pacho@gentoo.org","authorname":"Pacho Ramos","body":"Package-Manager: Portage-2.3.3, Repoman-2.3.1","commitid":"836b5ca891fcae762875a927afe65d1e6de9a99a","committime":"2016-12-28T11:35:27","packageid":48144,"repoid":1,"summary":"sci-chemistry\/vmd: Needs to be rebuilt with netcdf subslot bumps"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"ef24c6d38ee6f1f594bfced120ea11754942aaf9","committime":"2015-08-24T11:26:48","packageid":48144,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Convert all URLs for sites supporting encrypted connections from http to https\n\nSigned-off-by: Justin Lecher ","commitid":"eaaface92ee81f30a6ac66fe7acbcc42c00dc450","committime":"2015-08-24T10:47:45","packageid":48144,"repoid":1,"summary":"Use https by default"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":48144,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":48144,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"d5563ad3efdb142c9c9d262e8128329e5f97d728","committime":"2015-07-31T11:27:28","packageid":48144,"repoid":1,"summary":"2015-07-31 11:27:20 UTC"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"031ab90f832296041b61295e22bede84df976230","committime":"2015-07-30T10:25:11","packageid":48144,"repoid":1,"summary":"2015-07-30 10:25:05 UTC"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":48144,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":336,"description":"Fast array and numerical python library","ebuildids":[849075,849075,849075,849076,849076,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"numpy","packageid":42464,"summary":"NumPy is a general-purpose array-processing Python package designed to efficiently manipulate large multi-dimensional arrays of arbitrary records without sacrificing too much speed for small multi-dimensional arrays. There are also basic facilities for discrete fourier transform, basic linear algebra and random number generation. It is the successor of Numeric and numarray."},{"block":false,"categoryid":450,"description":"Freethreading (no-GIL) version of Python programming language","ebuildids":[849075,849075,849075,849076,849076,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"python@gentoo.org","maintainername":"Python","name":"python","packageid":43095},{"block":false,"categoryid":393,"description":"Stream-oriented XML parser library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"freedesktop-bugs@gentoo.org","maintainername":"Gentoo Freedesktop Project","name":"expat","packageid":44320},{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582},{"block":false,"categoryid":416,"description":"The ultimate molecular dynamics simulation package","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"ottxor@gentoo.org","maintainername":"Christoph Junghans","name":"gromacs","packageid":45952},{"block":false,"categoryid":330,"description":"Fast Light GUI Toolkit","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"desktop-misc@gentoo.org","maintainername":"Gentoo Desktop Miscellaneous Project","name":"fltk","packageid":46789,"summary":"The Fast Light ToolKit is a cross-platform C++ user interface toolkit for X and OpenGL. FLTK (pronounced \"fulltick\") provides GUI functionality and supports 3D graphics via OpenGL and its built-in GLUT emulation. FLTK also includes a UI builder called FLUID that can be used to create applications."},{"block":false,"categoryid":318,"description":"Scientific library and interface for array oriented data access","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"netcdf","packageid":47137,"summary":"NetCDF (network Common Data Form) is an interface for scientific data access and a freely-distributed software library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data."},{"block":false,"categoryid":396,"description":"Virtual for OpenGL implementation","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"opengl","packageid":50131},{"block":false,"categoryid":452,"description":"SQL database engine","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"arfrever.fta@gmail.com","maintainername":"Arfrever Frehtes Taifersar Arahesis","name":"sqlite","packageid":50388},{"block":false,"categoryid":330,"description":"X.Org Xi library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXi","packageid":52071},{"block":false,"categoryid":428,"description":"NVIDIA CUDA Toolkit (compiler and friends)","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"nvidia-cuda-toolkit","packageid":52124},{"block":false,"categoryid":330,"description":"X.Org Xinerama library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXinerama","packageid":53657},{"block":false,"categoryid":330,"description":"X.Org Xft library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXft","packageid":54139},{"block":false,"categoryid":450,"description":"Tk Widget Set","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"tcltk@gentoo.org","maintainername":"Gentoo Tcltk Project","name":"tk","packageid":54735},{"block":false,"categoryid":354,"description":"A portable, high performance parallel ray tracing system","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"alexxy@gentoo.org","maintainername":"Gentoo Science Project","name":"tachyon","packageid":55010}],"depending":[],"ebuilds":[{"archs":["~amd64","~amd64-linux","~x86","~x86-linux"],"ebuildid":849076,"firstseen":"2024-12-26T18:19:43.929829","license":"vmd","moddate":"2025-02-16T19:09:34","packageid":48144,"repoid":1,"slot":"0","uses":["cuda","gromacs","msms","povray","python_single_target_python3_10","python_single_target_python3_11","python_single_target_python3_12","sqlite","tachyon","xinerama"],"version":"1.9.4_alpha57-r3"},{"archs":["~amd64","~amd64-linux","~x86","~x86-linux"],"ebuildid":849075,"firstseen":"2024-12-26T18:19:43.929829","license":"vmd","moddate":"2025-02-16T19:09:34","packageid":48144,"repoid":1,"slot":"0","uses":["cuda","gromacs","msms","povray","python_single_target_python3_10","python_single_target_python3_11","python_single_target_python3_12","sqlite","tachyon","xinerama"],"version":"1.9.4_alpha57-r2"}],"masks":[],"package":{"categoryid":416,"description":"Visual Molecular Dynamics","firstseen":"2010-05-04T00:54:45.661860","maintainer":"alexxy@gentoo.org","maintainername":"Alexey Shvetsov","name":"vmd","packageid":48144},"rdependencies":[{"block":false,"categoryid":336,"description":"Fast array and numerical python library","ebuildids":[849075,849075,849075,849076,849076,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"numpy","packageid":42464,"summary":"NumPy is a general-purpose array-processing Python package designed to efficiently manipulate large multi-dimensional arrays of arbitrary records without sacrificing too much speed for small multi-dimensional arrays. There are also basic facilities for discrete fourier transform, basic linear algebra and random number generation. It is the successor of Numeric and numarray."},{"block":false,"categoryid":450,"description":"Freethreading (no-GIL) version of Python programming language","ebuildids":[849075,849075,849075,849076,849076,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"python@gentoo.org","maintainername":"Python","name":"python","packageid":43095},{"block":false,"categoryid":416,"description":"A collection of data files to add support for chemical MIME types","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-chemistry@gentoo.org","maintainername":"Gentoo Chemistry Project","name":"chemical-mime-data","packageid":43855},{"block":false,"categoryid":393,"description":"Stream-oriented XML parser library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"freedesktop-bugs@gentoo.org","maintainername":"Gentoo Freedesktop Project","name":"expat","packageid":44320},{"block":false,"categoryid":450,"description":"Larry Wall's Practical Extraction and Report Language","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"perl@gentoo.org","maintainername":"Gentoo Perl Project","name":"perl","packageid":44582},{"block":false,"categoryid":416,"description":"The ultimate molecular dynamics simulation package","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"ottxor@gentoo.org","maintainername":"Christoph Junghans","name":"gromacs","packageid":45952},{"block":false,"categoryid":330,"description":"Fast Light GUI Toolkit","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"desktop-misc@gentoo.org","maintainername":"Gentoo Desktop Miscellaneous Project","name":"fltk","packageid":46789,"summary":"The Fast Light ToolKit is a cross-platform C++ user interface toolkit for X and OpenGL. FLTK (pronounced \"fulltick\") provides GUI functionality and supports 3D graphics via OpenGL and its built-in GLUT emulation. FLTK also includes a UI builder called FLUID that can be used to create applications."},{"block":false,"categoryid":318,"description":"Scientific library and interface for array oriented data access","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"netcdf","packageid":47137,"summary":"NetCDF (network Common Data Form) is an interface for scientific data access and a freely-distributed software library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data."},{"block":false,"categoryid":382,"description":"Portland utils for cross-platform\/cross-toolkit\/cross-desktop interoperability","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"freedesktop-bugs@gentoo.org","name":"xdg-utils","packageid":47815},{"block":false,"categoryid":354,"description":"The Persistence of Vision Raytracer","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","name":"povray","packageid":48229},{"block":false,"categoryid":349,"description":"Terminal Emulator for X Windows","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"dickey@invisible-island.net","maintainername":"Thomas Dickey","name":"xterm","packageid":49418},{"block":false,"categoryid":396,"description":"Virtual for OpenGL implementation","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"opengl","packageid":50131},{"block":false,"categoryid":452,"description":"SQL database engine","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"arfrever.fta@gmail.com","maintainername":"Arfrever Frehtes Taifersar Arahesis","name":"sqlite","packageid":50388},{"block":false,"categoryid":353,"description":"Protein secondary structure assignment from atomic coordinates","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"stride","packageid":51967},{"block":false,"categoryid":330,"description":"X.Org Xi library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXi","packageid":52071},{"block":false,"categoryid":428,"description":"NVIDIA CUDA Toolkit (compiler and friends)","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"nvidia-cuda-toolkit","packageid":52124},{"block":false,"categoryid":330,"description":"X.Org Xinerama library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXinerama","packageid":53657},{"block":false,"categoryid":330,"description":"X.Org Xft library","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"x11@gentoo.org","maintainername":"X11","name":"libXft","packageid":54139},{"block":false,"categoryid":450,"description":"Tk Widget Set","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"tcltk@gentoo.org","maintainername":"Gentoo Tcltk Project","name":"tk","packageid":54735},{"block":false,"categoryid":354,"description":"A portable, high performance parallel ray tracing system","ebuildids":[849075,849076],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"alexxy@gentoo.org","maintainername":"Gentoo Science Project","name":"tachyon","packageid":55010},{"block":false,"categoryid":416,"description":"MSMS very efficiently computes triangulations of Solvent Excluded Surfaces","ebuildids":[849075,849076],"firstseen":"2010-10-31T14:36:36.232433","maintainer":"alexxy@gentoo.org","maintainername":"Gentoo Chemistry Project","name":"msms-bin","packageid":56456},{"block":false,"categoryid":416,"description":"Solvent accesible Surface calculator","ebuildids":[849075,849076],"firstseen":"2011-03-22T14:41:03.308363","maintainer":"sci-chemistry@gentoo.org","maintainername":"Gentoo Chemistry Project","name":"surf","packageid":57127}],"repos":[{"branch":"master","lastcommit":"b7bf9262eb087c76b42a7b5b181ed932a963d440","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["http:\/\/www.ks.uiuc.edu\/Research\/vmd\/"],"uses":[{"description":"Enable NVIDIA CUDA support (computation on GPU)","isdefault":false,"use":"cuda"},{"description":"Add support for TNG file format","isdefault":false,"packageid":48144,"use":"gromacs"},{"description":"Add support for MSMS SES calcualtion tool","isdefault":false,"packageid":48144,"use":"msms"},{"description":"Add support for povray raytracer for HQ images","isdefault":false,"packageid":48144,"use":"povray"},{"description":"Add support for sqlite - embedded sql database","isdefault":false,"use":"sqlite"},{"description":"Add support for tachyon raytracer for HQ images","isdefault":false,"packageid":48144,"use":"tachyon"},{"description":"Add support for querying multi-monitor screen geometry through the Xinerama API","isdefault":false,"use":"xinerama"},{"description":"Build for Python 3.10 only","group":"python_single_target","isdefault":false,"use":"python3_10"},{"description":"Build for Python 3.11 only","group":"python_single_target","isdefault":false,"use":"python3_11"},{"description":"Build for Python 3.12 only","group":"python_single_target","isdefault":false,"use":"python3_12"}]}