{"bugs":[{"bugid":430028,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-4.5.8: collides with sci-geosciences\/gshhs"},{"bugid":787869,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-5.4.4 - file collision with sci-geosciences\/gmaptool-08220"},{"bugid":831599,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-5.4.4 fails to compile: grdlandmask.c:470:2: error: condition of OpenMP for loop must be a relational comparison (<, <=, >, >=, or !=) of loop variable row"},{"bugid":886169,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-6.4.0 fails to compile (CLANG-STRICTER-SYSTEM): common_sighandler.c:190:73: error: call to undeclared function strsignal; ISO C99 and later do not support implicit function declarations [-Werror,-Wimplicit-function-declaration]"},{"bugid":886173,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-6.3.0 installs files that contain insecure RUNPATHs"},{"bugid":890421,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-6.4.0 fails to compile: Cannot determine GSHHG version:"},{"bugid":894990,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-6.4.0 - -- Configuring incomplete, errors occurred!"},{"bugid":926840,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-geosciences\/gmt-6.4.0-r1 problems with installed bash completions"}],"categories":[{"categoryid":391,"name":"app-text","summary":"The app-text category contains tools for working with human-language text files."},{"categoryid":393,"name":"dev-libs","summary":"The dev-libs category contains various miscellaneous programming libraries."},{"categoryid":354,"name":"media-gfx","summary":"The media-gfx category contains graphics-related packages."},{"categoryid":342,"name":"media-video","summary":"The media-video category contains video-related applications."},{"categoryid":451,"name":"net-misc","summary":"The net-misc category contains various miscellaneous networking tools and utilities."},{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":455,"name":"sci-geosciences","summary":"The sci-geosciences category contains geosciences-related software."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"5a1adb610b1d91ab6683cbe671e266f424224c16","committime":"2025-11-04T08:35:48","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Update done using:\n\n```\ngit grep -l sys-libs\/zlib dev-* | xargs sed -i -e s@sys-libs\/zlib@virtual\/zlib@g\ngit diff --name-only | xargs copybump\ngit diff --name-only | xargs grep -l PYTHON_COMPAT | xargs gpy-impl -@dead\npkgcheck scan --commits -c SourcingCheck,VisibilityCheck --exit error\n```\n\nSigned-off-by: Michał Górny <mgorny@gentoo.org>","commitid":"f1351833569f8b22abc3dc9e74abeed7e8641096","committime":"2025-11-04T08:17:06","packageid":43369,"repoid":1,"summary":"sci-*\/*: update for virtual\/zlib"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"9e29a542cd4f7bcc9a9f93d8b6b78038ea5cd279","committime":"2024-12-01T08:48:25","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mario.haustein@hrz.tu-chemnitz.de","authorname":"Mario Haustein","body":"[sam: Revbump for modern C fix.]\n\nCloses: https:\/\/bugs.gentoo.org\/945480\nSigned-off-by: Mario Haustein <mario.haustein@hrz.tu-chemnitz.de>\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/39531\nSigned-off-by: Sam James <sam@gentoo.org>","commitid":"3ca573c730559e095047180c04dc4f45dcaf758f","committime":"2024-11-30T16:08:04","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: fix implicit function declaration"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"75aebbea620e98e6e6a1b26b28a5f4e5f16c26c9","committime":"2023-06-10T20:31:54","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Closes: https:\/\/bugs.gentoo.org\/892433\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"41453efeb8036e1fa3086dfc4554c9d539380be8","committime":"2023-06-10T19:28:26","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: drop 5.4.4"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f2979793991144637956e4225ce4d0235900c1a2","committime":"2023-06-09T15:16:56","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"arthurzam@gentoo.org","authorname":"Arthur Zamarin","body":"Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>","commitid":"c6057b2e7ab0464f297686f0316895e841e6aaa2","committime":"2023-06-03T14:49:10","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: destabilize for ~x86"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d9d722bb90f8b647586d33309a862a4b32167f25","committime":"2023-02-07T17:02:01","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James <sam@gentoo.org>","commitid":"ecfac65e98287cdc6b53a36bfe57b75e4745f549","committime":"2023-02-07T16:54:01","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: Stabilize 6.4.0 amd64, #892433"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a6a622b4f4f48e9c0404968a5fc97ab2f3776fe9","committime":"2023-01-28T23:16:51","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"1a93e3bf22879fc4f777df1137548a25f85327c7","committime":"2023-01-28T18:37:25","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: drop 4.5.18-r1, 6.3.0"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"67c9898ea854651c6f9d232f1d3f98bf7b6e6927","committime":"2022-12-18T04:32:04","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James <sam@gentoo.org>","commitid":"2a082b5927d8ce78df7ff729a11227bd38afbdb6","committime":"2022-12-18T04:18:54","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: add 6.4.0"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"8f0a768b0ec515ae075d91ae2cad10136890e4b4","committime":"2022-04-12T21:19:15","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Smaller tarballs.\n\nSigned-off-by: Sam James <sam@gentoo.org>","commitid":"7edbb9981c89808d509d7136835230bdb629d64f","committime":"2022-04-12T12:20:00","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: switch to xz"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"1befb2fabe360f2aaf63a76c49ee92ab7a714f33","committime":"2022-03-01T12:06:56","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"andrewammerlaan@gentoo.org","authorname":"Andrew Ammerlaan","body":"Co-authored-by: Daniel Peters <sir_tuam@web.de>\nCloses: https:\/\/bugs.gentoo.org\/728500\nPackage-Manager: Portage-3.0.30, Repoman-3.0.3\nSigned-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>","commitid":"b9857b8e20f45d0d4d477eaab0acf4e2798ba191","committime":"2022-03-01T11:56:57","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: add version 6.3.0"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"d259c83a3d9b4a5c8694d6458b822b1005b996ed","committime":"2021-03-03T17:51:57","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jakov.smolic@sartura.hr","authorname":"Jakov Smolic","body":"* Fix undeclared sys_siglist issue. Thanks to hangglider@gmx.de for providing the patch.\n\nThanks-to: hangglider@gmx.de\nCloses: https:\/\/bugs.gentoo.org\/738224\nCloses: https:\/\/bugs.gentoo.org\/710088\nSigned-off-by: Jakov Smolic <jakov.smolic@sartura.hr>\nSigned-off-by: Sam James <sam@gentoo.org>","commitid":"581973a7c1aff3201ff85b07b7004f53156ce7d0","committime":"2021-03-02T20:08:06","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: Apply gcc-10 workaround"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a8512d71b7ee1aef1c9f931ee9927eb1d3da4afc","committime":"2020-06-04T07:10:20","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.99, Repoman-2.3.22\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo <ago@gentoo.org>","commitid":"2e294378237643d16d542528e4272071ab5dc8de","committime":"2020-06-04T06:28:26","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: x86 stable wrt bug #712246"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"9fcdda8058d9cf226222872b52d215066af513da","committime":"2020-05-29T08:08:51","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.99, Repoman-2.3.22\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo <ago@gentoo.org>","commitid":"21b7b0625600590ecb02a8ce14607b687b6bce5b","committime":"2020-05-29T07:38:24","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: amd64 stable wrt bug #712246"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e9c19253f6160fffea07f45e1ab5fc967e7e716c","committime":"2020-02-18T03:36:53","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Package-Manager: Portage-2.3.89, Repoman-2.3.20\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"962d783e8f971b4c82a0b457fa9c4f6be56e8005","committime":"2020-02-18T03:04:19","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: Drop 4.5.6"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"eddc39480ebd00a216c38772a882804317b86162","committime":"2020-02-17T12:36:42","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.84, Repoman-2.3.20\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo <ago@gentoo.org>","commitid":"8a98303442db42f8ef36fdde6c000f04378ca7db","committime":"2020-02-17T12:20:59","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: x86 stable wrt bug #709828"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-2.3.84, Repoman-2.3.20\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo <ago@gentoo.org>","commitid":"1b4c0af40e8d896a12437c95d66ca55201f2b6f4","committime":"2020-02-17T12:12:50","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: amd64 stable wrt bug #709828"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"eabdc82a60ce6fb27745ad7e406c7a6957f42436","committime":"2020-02-16T17:40:36","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"fix unused cmake vars\ndrop optional runtime USE - dcw and gshhg did not switch any build options,\nso technically are RDEPEND optional. Hard-depend on them instead.\n\nPackage-Manager: Portage-2.3.89, Repoman-2.3.20\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"43bf958195aaff2a083ccde319081b2e1018a3fb","committime":"2020-02-16T16:05:44","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: EAPI-7, cmake.eclass, slot ops, style"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Package-Manager: Portage-2.3.89, Repoman-2.3.20\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"557843f933be99d24274fadaffdf9e71ae41eda2","committime":"2020-02-16T15:52:02","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: Drop 4.5.8, 4.5.9, 4.5.18"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Closes: https:\/\/bugs.gentoo.org\/670226\nPackage-Manager: Portage-2.3.89, Repoman-2.3.20\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"55fe9c5b26895e3f338047a70b57bee78c0641af","committime":"2020-02-16T15:50:24","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: EAPI-7, style fixes, re-add eautoreconf"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"0ddc87e07b959a78264b88b2b256b974eb813537","committime":"2020-02-13T22:06:49","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.88, Repoman-2.3.20\nSigned-off-by: David Seifert <soap@gentoo.org>","commitid":"8e9f7956eb10f19ffaff84ce760de152044cc644","committime":"2020-02-13T21:38:09","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: [QA] inherit toolchain-funcs.eclass directly"},{"authoremail":"uleysky@gmail.com","authorname":"Michael Uleysky","body":"Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"ec3bf8a6ee69aea6be83b2197915763c9962d505","committime":"2018-08-21T04:38:19","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: 5.4.4 version bump"},{"authoremail":"uleysky@gmail.com","authorname":"Michael Uleysky","body":"Add new flags that control the installation of documentation.\n\nSigned-off-by: Andreas Sturmlechner <asturm@gentoo.org>","commitid":"c536857dc3ca88dc25936ad650c17a7591574df6","committime":"2018-08-21T04:35:53","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: DEPEND on gshhg-data, fine-grained doc USE"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"ecb0a7fa3b564ace31d27d61f5ca47631691069b","committime":"2018-08-18T09:44:11","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"uleysky@gmail.com","authorname":"Michael Uleysky","body":"Closes: https:\/\/github.com\/gentoo\/gentoo\/pull\/9454","commitid":"313d2aef432078db4a1d72fbb450d35066d4aa06","committime":"2018-05-31T05:37:22","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: version bump 4.5.18"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":43369,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"8b16c2dced2bf58c6ab3caf06c5861273a20b847","committime":"2016-01-10T20:21:48","packageid":43369,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"amynka@gentoo.org","authorname":"Amy Winston","body":"Package-Manager: portage-2.2.24","commitid":"f6e3cb92f3e41ab3ea359f8a1bf099707081bf79","committime":"2016-01-10T20:04:28","packageid":43369,"repoid":1,"summary":"sci-geosciences\/gmt: fetch repaired bug #561202"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":43369,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson <robbat2@gentoo.org>\nX-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts\nX-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":43369,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"4fd0a9fa186b0fc4ddc85fa2926486febd5d436c","committime":"2015-07-26T21:45:13","packageid":43369,"repoid":1,"summary":"2015-07-26 21:43:13 UTC"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":43369,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":391,"description":"Interpreter for the PostScript language and PDF","ebuildids":[846316],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"printing@gentoo.org","maintainername":"Gentoo Printing Project","name":"ghostscript-gpl","packageid":43199},{"block":false,"categoryid":396,"description":"Virtual for FORTRAN 77 BLAS implementation","ebuildids":[846316],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"blas","packageid":43239},{"block":false,"categoryid":318,"description":"Fast C library for the Discrete Fourier Transform","ebuildids":[846316],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"fftw","packageid":46108,"summary":"The Fastest Fourier Transform in the West is a C subroutine library for computing the Discrete Fourier Transform (DFT) in one or more dimensions, of both real and complex data, and of arbitrary input size. It is becoming the FFT library of choice for most applications. Benchmarks, performed on a variety of platforms, show that FFTW's performance is typically superior to that of other publicly available FFT software."},{"block":false,"categoryid":318,"description":"Scientific library and interface for array oriented data access","ebuildids":[846316],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"netcdf","packageid":47137,"summary":"NetCDF (network Common Data Form) is an interface for scientific data access and a freely-distributed software library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. 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