Versions
v4.0.3 :: 0/4 :: gentoo (Masked by set 6678)
- Modified
- License
- LGPL-2.1+ modify? ( GPL-2+ ) matrixops? ( GPL-2+ )
- Keywords
- ~amd64 ~amd64-linux ~arm ~arm64 ~hppa ~ia64 ~loong ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~x86-linux
- USE flags
- cholesky cuda doc matrixops modify openmp partition supernodal test
v3.0.14 :: 0 :: gentoo
- Modified
- License
- LGPL-2.1+ modify? ( GPL-2+ ) matrixops? ( GPL-2+ )
- Keywords
- amd64 arm arm64 ppc64 sparc x86 ~amd64-linux ~arm64-macos ~hppa ~ia64 ~loong ~mips ~ppc ~riscv ~s390 ~x64-macos ~x86-linux
- USE flags
- cuda doc lapack matrixops modify partition
v3.0.13 :: 0 :: gentoo
- Modified
- License
- LGPL-2.1+ modify? ( GPL-2+ ) matrixops? ( GPL-2+ )
- Keywords
- amd64 arm arm64 ppc64 x86 ~amd64-linux ~hppa ~ia64 ~mips ~ppc ~sparc ~x86-linux
- USE flags
- cuda doc lapack matrixops modify partition
USE flags
General
- cholesky
- Enable sparse Cholesky factorisation
- cuda
- Use nvidia cuda toolkit for speeding up computations
- doc
- Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally
- lapack
- Add support for the virtual/lapack numerical library
- matrixops
- Support basic sparse and dense matrix operations (add, multiply, scale, et cetera)
- modify
- Enable Cholesky-modification routines like update, downdate, row-add, and row-delete
- openmp
- Build support for the OpenMP (support parallel computing), requires >=sys-devel/gcc-4.2 built with USE="openmp"
- partition
- Enable graph partitioning and graph-partition-based orderings through sci-libs/metis (using a bundled fork in 4.0.0+) or sci-libs/parmetis
- supernodal
- supernodal cholesky factorisation
- test
- Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)
abi_mips
- n32
- 64-bit (32-bit pointer) libraries
- n64
- 64-bit libraries
- o32
- 32-bit libraries
abi_s390
- 32
- 32-bit (s390) libraries
- 64
- 64-bit (s390x) libraries
abi_x86
- 32
- 32-bit (x86) libraries
- 64
- 64-bit (amd64) libraries
- x32
- x32 ABI libraries
Dependencies
dev-util / nvidia-cuda-toolkit : NVIDIA CUDA Toolkit (compiler and friends)
sci-libs / amd : Library to order a sparse matrix prior to Cholesky factorization
sci-libs / camd : Library to order a sparse matrix prior to Cholesky factorization
sci-libs / ccolamd : Constrained Column approximate minimum degree ordering algorithm
sci-libs / colamd : Column approximate minimum degree ordering algorithm
sci-libs / metis : A package for unstructured serial graph partitioning
sci-libs / suitesparseconfig : Common configurations for all packages in suitesparse
virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation
x11-drivers / nvidia-drivers : NVIDIA Accelerated Graphics Driver
Runtime Dependencies
dev-util / nvidia-cuda-toolkit : NVIDIA CUDA Toolkit (compiler and friends)
sci-libs / amd : Library to order a sparse matrix prior to Cholesky factorization
sci-libs / camd : Library to order a sparse matrix prior to Cholesky factorization
sci-libs / ccolamd : Constrained Column approximate minimum degree ordering algorithm
sci-libs / colamd : Column approximate minimum degree ordering algorithm
sci-libs / metis : A package for unstructured serial graph partitioning
sci-libs / suitesparseconfig : Common configurations for all packages in suitesparse
virtual / lapack : Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation
x11-drivers / nvidia-drivers : NVIDIA Accelerated Graphics Driver
Depending packages
dev-cpp / eigen : C++ template library for linear algebra
dev-lang / julia : High-performance programming language for technical computing
dev-python / cvxopt : Python package for convex optimization
games-strategy / naev : 2D space trading and combat game, in a similar vein to Escape Velocity
sci-libs / ceres-solver : Nonlinear least-squares minimizer
sci-libs / coinor-clp : COIN-OR linear programming solver
sci-libs / klu : Sparse LU factorization for circuit simulation
sci-libs / spqr : Multithreaded multifrontal sparse QR factorization library
sci-libs / suitesparse : Metapackage for a suite of sparse matrix tools
sci-libs / umfpack : Unsymmetric multifrontal sparse LU factorization library
sci-mathematics / octave : High-level interactive language for numerical computations
sci-mathematics / petsc : Portable, Extensible Toolkit for Scientific Computation
Bugs
- 711540
- sci-libs/cholmod-3.0.13 : configure: error: Could not find ccolamd library
- 715610
- sci-libs/cholmod-3.0.13: emake failed: nvcc fatal: Unknown option '-fPIC'
- 829502
- sci-libs/suitesparse to 5.10.1 (and related) version bump request (5.4.0 is blocking cleanup of sci-libs/cholmod-3.0.13)
- 904973
- sci-libs/cholmod-3.0.14 cholmod_gpu.h: No such file or directory
- 908858
- sci-libs/cholmod-4.0.3 installs '.a' files without static-libs USE
- 913921
- sci-libs/cholmod-3.0.14 - failes to compile with cuda, missing cholmod_gpu.h
Masks
6678- Michał Górny
suitesparseconfig-7.0.0 fails to build with multilib enabled because of dependencies that cannot be satisfied. All the other packages require it. Bug #908851.- =sci-libs/amd-3.0.3
- =sci-libs/btf-2.0.3
- =sci-libs/camd-3.0.3
- =sci-libs/ccolamd-3.0.3
- =sci-libs/cholmod-4.0.3
- =sci-libs/colamd-3.0.3
- =sci-libs/cxsparse-4.0.3
- =sci-libs/klu-2.0.3
- =sci-libs/ldl-3.0.3
- =sci-libs/spqr-3.0.3
- =sci-libs/suitesparseconfig-7.0.0
- =sci-libs/umfpack-6.1.0
Change logs
- Repository mirror & CI · gentoo
Merge updates from master - Benda Xu · gentoo
dev-python/scipy: keyword it and its dependences.
keyword 1.11.1 for ~arm64-macos, ~x64-macos dev-python/gast: keyword 0.5.3-r1 for ~arm64-macos, ~x64-macos dev-python/beniget: keyword 0.4.1-r1 for ~arm64-macos, ~x64-macos dev-python/pythran: keyword 0.13.1 for ~arm64-macos, ~x64-macos sci-libs/gklib: keyword 5.1.1_p20230327-r1 for ~arm64-macos, ~x64-macos sci-libs/metis: keyword 5.2.1-r2 for ~arm64-macos, ~x64-macos sci-libs/ccolamd: keyword 2.9.6 for ~arm64-macos, ~x64-macos sci-libs/camd: keyword 2.4.6-r1 for ~arm64-macos, ~x64-macos sci-libs/colamd: keyword 2.9.6 for ~arm64-macos, ~x64-macos sci-libs/cholmod: keyword 3.0.14 for ~arm64-macos, ~x64-macos sci-libs/suitesparseconfig: keyword 5.4.0 for ~arm64-macos, ~x64-macos sci-libs/amd: keyword 2.4.6-r1 for ~arm64-macos, ~x64-macos sci-libs/umfpack: keyword 5.7.9 for ~arm64-macos, ~x64-macos sci-libs/arpack: keyword 3.8.0 for ~arm64-macos, ~x64-macos dev-python/charset-normalizer: keyword 3.2.0 for ~arm64-macos, ~x64-macos dev-python/requests: keyword 2.31.0 for ~arm64-macos, ~x64-macos dev-python/pooch: keyword 1.7.0 for ~arm64-macos, ~x64-macos Signed-off-by: Benda Xu <heroxbd@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michael Orlitzky · gentoo
sci-libs/cholmod: revert "sci-libs/cholmod: drop 3.0.13"
This reverts commit 1f96092b44d5d5ccc9d703328630366f33b305dc. The stable sci-libs/suitesparse-5.4.0 has, RDEPEND=" ... ~sci-libs/cholmod-3.0.13[cuda?,doc?,partition?,lapack?] which won't accept the stable cholmod-3.0.14 that I thought could replace 3.0.13. Signed-off-by: Michael Orlitzky <mjo@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michael Orlitzky · gentoo
sci-libs/cholmod: drop 3.0.13
Signed-off-by: Michael Orlitzky <mjo@gentoo.org> - François Bissey · gentoo
sci-libs/cholmod: add 4.0.3
Signed-off-by: François Bissey <frp.bissey@gmail.com> Signed-off-by: Michael Orlitzky <mjo@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Arthur Zamarin · gentoo
sci-libs/cholmod: destabilize for ~ppc
Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - WANG Xuerui · gentoo
sci-libs/cholmod: keyword 3.0.14 for ~loong
Signed-off-by: WANG Xuerui <xen0n@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: Keyword 3.0.14 s390, #862330
Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Marek Szuba · gentoo
*/*: update sci-libs/{,par}metis revdeps
ParMETIS on the one hand no longer installs bundled METIS and on the other unconditionally depends on MPI. Therefore, only keep it in ebuilds which use MPI themselves and depend on METIS directly otherwise. Note that some of the alleged sci-libs/parmetis revdeps might in fact not use even when they use MPI, as none of these revdeps have actually explicitly requested sci-libs/parmetis[mpi]. Signed-off-by: Marek Szuba <marecki@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Marek Szuba · gentoo
sci-libs/cholmod: keyword 3.0.14 for ~riscv
Signed-off-by: Marek Szuba <marecki@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 amd64, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 ppc, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 x86, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Andreas Sturmlechner · gentoo
sci-libs/cholmod: Drop 2.1.2, EAPI5--
Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sergei Trofimovich · gentoo
sci-libs/cholmod: stable 3.0.14 for ppc64
stable wrt bug #765760 Package-Manager: Portage-3.0.14, Repoman-3.0.2 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 arm64, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 sparc, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.14 arm, #765760
Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Fabian Groffen · gentoo
sci-libs/cholmod: drop x86-macos
Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Fabian Groffen <grobian@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: Stabilize 3.0.13 arm, #709830
Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Miroslav Šulc · gentoo
sci-libs/cholmod: bump to 3.0.14
removed unnecessary version specifiers Closes: https://bugs.gentoo.org/745444 Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Miroslav Šulc <fordfrog@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michael Mair-Keimberger · gentoo
sci-libs/cholmod: update HOMEPAGE, use https
Closes: https://github.com/gentoo/gentoo/pull/17541 Package-Manager: Portage-3.0.6, Repoman-3.0.1 Signed-off-by: Michael Mair-Keimberger <m.mairkeimberger@gmail.com> Signed-off-by: Conrad Kostecki <conikost@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - David Seifert · gentoo
sci-libs/cholmod: Remove libtool archives
Package-Manager: Portage-3.0.4, Repoman-3.0.1 Signed-off-by: David Seifert <soap@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Andreas Sturmlechner · gentoo
sci-libs/cholmod: Drop to ~hppa
No stable revdeps. Package-Manager: Portage-3.0.0, Repoman-2.3.23 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Sam James · gentoo
sci-libs/cholmod: x86 stable (bug #716960)
Package-Manager: Portage-2.3.103, Repoman-2.3.23 Signed-off-by: Sam James <sam@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Repository mirror & CI · gentoo
Merge updates from master - Agostino Sarubbo · gentoo
sci-libs/cholmod: amd64 stable wrt bug #716960
Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org> - Sam James (sam_c) · gentoo
sci-libs/cholmod: arm64 stable (bug #716960)
Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Sam James (sam_c) <sam@cmpct.info> Signed-off-by: Mart Raudsepp <leio@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Agostino Sarubbo · gentoo
sci-libs/cholmod: ppc64 stable wrt bug #716960
Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org> - Agostino Sarubbo · gentoo
sci-libs/cholmod: ppc stable wrt bug #716960
Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michael Orlitzky · gentoo
sci-libs/cholmod: new version 3.0.13.
Update to EAPI=7 and fix the HOMEPAGE, SRC_URI, and LICENSE. This is part of a larger SuiteSparse v5.4.0 upgrade thanks to François Bissey whose sage-on-gentoo ebuilds I'm using. There's a newer release (v5.7.1) of SuiteSparse, but v5.4.0 has seen more testing. This new version also refactors the package's USE flags, because USE=minimal was being used to control the installation of several different modules that all do different things. It's much better for users to have three individual flags that control those options. Moreover, with USE=minimal, there was a conflict between the "minimal" and "metis" flags; both would try to control the --with-partition option. Finally, the "metis" USE flag was dropped in favor of the name "partition". Closes: https://bugs.gentoo.org/526910 Closes: https://bugs.gentoo.org/682838 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Michał Górny · gentoo
sci-libs: Remove *-fbsd KEYWORDS
Signed-off-by: Michał Górny <mgorny@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Aaron Bauman · gentoo
sci-libs/cholmod: arm64 stable
Signed-off-by: Aaron Bauman <bman@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.12 RepoMan-Options: --include-arches="arm64" - Repository mirror & CI · gentoo
Merge updates from master - Justin Lecher · gentoo
sci-libs/cholmod: fix metis dep
Closes: https://bugs.gentoo.org/672000 Package-Manager: Portage-2.3.53, Repoman-2.3.12 Signed-off-by: Justin Lecher <jlec@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Justin Lecher · gentoo
sci-libs/cholmod: fix metis dep
Closes: https://bugs.gentoo.org/672000 Package-Manager: Portage-2.3.53, Repoman-2.3.12 Signed-off-by: Justin Lecher <jlec@gentoo.org> - Repository mirror & CI · gentoo
Merge updates from master - Justin Lecher · gentoo
sci-libs/cholmod: Update HOMPAGE
Package-Manager: Portage-2.3.53, Repoman-2.3.12 Signed-off-by: Justin Lecher <jlec@gentoo.org> - Alexis Ballier · gentoo
sci-libs/cholmod: keyword ~arm64
Package-Manager: Portage-2.3.6, Repoman-2.3.2 - Sergei Trofimovich · gentoo
sci-libs/cholmod: ia64 keyworded, bug #575366
Package-Manager: Portage-2.3.6, Repoman-2.3.2 - Robin H. Johnson · gentoo
Drop $Id$ per council decision in bug #611234.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> - Tobias Klausmann · gentoo
sci-libs/cholmod-2.1.2-r0: add ~alpha keyword
Gentoo-Bug: 575366 Package-Manager: portage-2.3.0_rc1 - Justin Lecher · gentoo
Use https by default
Convert all URLs for sites supporting encrypted connections from http to https Signed-off-by: Justin Lecher <jlec@gentoo.org> - Robin H. Johnson · gentoo
proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed