{"bugs":[{"bugid":722620,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-libs\/lemon-1.3.1 : \/...\/ld: \/...\/libClp.so: undefined reference to CoinArrayWithLength::conditionalNew(long)"},{"bugid":741512,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-libs\/lemon-1.3.1 fails tests"},{"bugid":942120,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-libs\/lemon-1.3.1-r2 fails to compile: ld: libClpSolver.so.1: undefined reference to f_read_ASL"}],"categories":[{"categoryid":353,"name":"sci-biology","summary":"The sci-biology category contains software that can be used in biological and related scientific environments."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":317,"name":"sci-mathematics","summary":"The sci-mathematics category contains mathematical software."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"98aea543c1f58b9ea0ff2ec0a98895d94c28bc84","committime":"2025-12-19T22:46:00","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Signed-off-by: Andreas Sturmlechner ","commitid":"045bdb6ba95a2b5dc92b06c1074fd3bd462b2a7f","committime":"2025-12-19T22:37:41","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: Replace odd seds with a patch"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Closes: https:\/\/bugs.gentoo.org\/967729\nCloses: https:\/\/bugs.gentoo.org\/967734\nSigned-off-by: Andreas Sturmlechner ","commitid":"12e6c1ee15c0a849709b1ce54ad4be15d9f66a08","committime":"2025-12-19T22:34:01","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: Fix build w\/ cmake-4"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a198e862478387fe37b4d232d51a3edb558cd3e0","committime":"2025-12-19T10:01:01","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Bug: https:\/\/bugs.gentoo.org\/473598\nBug: https:\/\/bugs.gentoo.org\/720224\nSigned-off-by: Fabian Groffen ","commitid":"2d25fad95cbaa525c8945d8e582c749d49524f49","committime":"2025-12-19T09:25:43","packageid":61807,"repoid":1,"summary":"*\/*: drop *-linux keywords"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3548511996bfd3574f9e3a3a433fb9e7526f3f58","committime":"2024-01-12T15:05:10","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Per the category metadata, app-doc\/ is reserved for documentation\n*files* and not software. Move it to app-text\/ where it seems a better\nfit.\n\nSigned-off-by: Michał Górny ","commitid":"f7fdfdaeec3764929686064a6054c38a6b2d7788","committime":"2024-01-11T16:04:37","packageid":61807,"repoid":1,"summary":"Move {app-doc → app-text}\/doxygen"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"db71d43a9d9c5ebcfce373e3f1d955a4d117fea9","committime":"2023-08-16T20:31:35","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mjo@gentoo.org","authorname":"Michael Orlitzky","body":"Upstream (last release in 2014) requires the old mathjax-2.x, so when we\nadd mathjax-3.x, bad things will happen otherwise.\n\nBug: https:\/\/bugs.gentoo.org\/837722\nSigned-off-by: Michael Orlitzky ","commitid":"c5c38c303dc73ffec34cfa9263c9c87af24fae74","committime":"2023-08-16T13:14:38","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: add dev-libs\/mathjax upper bound"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"b6d975d5b602ab4ef61faecd848534b1d5617543","committime":"2022-02-26T21:21:44","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"5610c07de5fc79bd5cfe272cd959d9a03b7c171a","committime":"2022-02-26T21:09:37","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: drop 1.3.1"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"ea8e8a89bcd911c655ea9856641bd8f97f53d4bd","committime":"2022-02-26T21:05:13","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: update EAPI 6 -> 8"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"fef742528aacdd4ffa4e59ea0354106ca161650e","committime":"2019-12-10T23:48:11","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"The result was achieved via the following pipeline:\n\n pkgcheck scan -c RestrictTestCheck -R FormatReporter \\\n --format '{category}\/{package}\/{package}-{version}.ebuild' |\n xargs -n32 grep -L RESTRICT |\n xargs -n32 sed -i -e '\/^IUSE=.*test\/aRESTRICT=\"!test? ( test )\"'\n\nThe resulting metadata was compared before and after the change.\nFew Go ebuilds had to be fixed manually due to implicit RESTRICT=strip\nadded by the eclass. Two ebuilds have to be fixed because of multiline\nIUSE.\n\nSuggested-by: Robin H. Johnson \nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/13942\nSigned-off-by: Michał Górny ","commitid":"064af661d0c9a31cecdf348632bc5603333a9149","committime":"2019-12-10T22:02:54","packageid":61807,"repoid":1,"summary":"*\/*: [QA] Fix trivial cases of MissingTestRestrict"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"36839d86908b9be572123a7298710109fc5d3723","committime":"2018-10-15T21:24:06","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Closes: https:\/\/bugs.gentoo.org\/600750\nSigned-off-by: Andreas Sturmlechner \nPackage-Manager: Portage-2.3.51, Repoman-2.3.11","commitid":"aabcb73fb37d1a9adea76de1a90842406ec75dba","committime":"2018-10-15T21:09:26","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: Drop 1.3-r2"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Use cmake-utils functions instead of manual sed.\nFix unused cmake args.\nFix USE doc install location.\nDrop USE tools, only saved a minuscule amount of space.\n\nCloses: https:\/\/bugs.gentoo.org\/668570\nSigned-off-by: Andreas Sturmlechner \nPackage-Manager: Portage-2.3.51, Repoman-2.3.11","commitid":"f6fc01bed0963a5e27c782f1531ee5da9d4c8aeb","committime":"2018-10-15T20:21:14","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: 1.3.1 version bump, EAPI-6 bump, fix multilib"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"777416e9f004d0fe019cad34ed52a7d99512e3ca","committime":"2018-10-14T13:46:15","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Signed-off-by: Andreas Sturmlechner \nPackage-Manager: Portage-2.3.51, Repoman-2.3.11","commitid":"84616e1df155ff504471c52a5f6c8976833aa199","committime":"2018-10-14T10:46:50","packageid":61807,"repoid":1,"summary":"sci-libs\/lemon: Sort DEPENDs, one line per dep, https download"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":61807,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":61807,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":61807,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":61807,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":61807,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":317,"description":"GNU Linear Programming Kit","ebuildids":[796594],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"robbat2@gentoo.org","maintainername":"Gentoo Mathematics Project","name":"glpk","packageid":44310,"summary":"The GNU Linear Programming Kit package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems. It is a set of routines written in ANSI C and organized in the form of a callable library."},{"block":false,"categoryid":318,"description":"COIN-OR branch-and-cut mixed integer program solver","ebuildids":[796594],"firstseen":"2014-01-15T14:46:35.049138","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"coinor-cbc","packageid":61815,"summary":"COIN-OR Branch-and-Cut is a Mixed integer linear programming solver. It uses many of the COIN-OR components and is designed to be used with COIN-OR CLP or COIN-OR Dylp. It is available as a library and as a standalone solver."},{"block":false,"categoryid":318,"description":"COIN-OR linear programming solver","ebuildids":[796594],"firstseen":"2014-01-15T14:46:35.049138","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"coinor-clp","packageid":61817,"summary":"Clp (Coin-OR linear programming) is an open-source linear programming solver written in C++. It is primarily meant to be used as a callable library, but a basic, stand-alone executable version is also available. It is designed to find solutions of constrained linear mathematical optimization problems."}],"depending":[{"block":false,"categoryid":353,"description":"C++ Sequence Analysis Library","ebuildids":[741441,741441],"firstseen":"2013-03-14T14:36:03.414471","maintainer":"sci-biology@gentoo.org","maintainername":"Gentoo Biology Project","name":"seqan","packageid":60538}],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":796594,"firstseen":"2023-08-16T21:44:33.647080","license":"Boost-1.0","moddate":"2026-03-28T18:04:21","packageid":61807,"repoid":1,"slot":"0","uses":["coin","doc","glpk","static-libs","test"],"version":"1.3.1-r2"}],"masks":[],"package":{"categoryid":318,"description":"C++ template static library of common data structures and algorithms","firstseen":"2014-01-14T14:46:49.842361","maintainer":"mmokrejs@gmail.com","maintainername":"Martin Mokrejs","name":"lemon","packageid":61807,"summary":"LEMON stands for Library for Efficient Modeling and Optimization in Networks. It is a C++ template library providing efficient implementations of common data structures and algorithms with focus on combinatorial optimization tasks connected mainly with graphs and networks."},"rdependencies":[{"block":false,"categoryid":317,"description":"GNU Linear Programming Kit","ebuildids":[796594],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"robbat2@gentoo.org","maintainername":"Gentoo Mathematics Project","name":"glpk","packageid":44310,"summary":"The GNU Linear Programming Kit package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems. It is a set of routines written in ANSI C and organized in the form of a callable library."},{"block":false,"categoryid":318,"description":"COIN-OR branch-and-cut mixed integer program solver","ebuildids":[796594],"firstseen":"2014-01-15T14:46:35.049138","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"coinor-cbc","packageid":61815,"summary":"COIN-OR Branch-and-Cut is a Mixed integer linear programming solver. It uses many of the COIN-OR components and is designed to be used with COIN-OR CLP or COIN-OR Dylp. It is available as a library and as a standalone solver."},{"block":false,"categoryid":318,"description":"COIN-OR linear programming solver","ebuildids":[796594],"firstseen":"2014-01-15T14:46:35.049138","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"coinor-clp","packageid":61817,"summary":"Clp (Coin-OR linear programming) is an open-source linear programming solver written in C++. It is primarily meant to be used as a callable library, but a basic, stand-alone executable version is also available. It is designed to find solutions of constrained linear mathematical optimization problems."}],"repos":[{"branch":"master","lastcommit":"f87ce2b74421571078063820dc1065e7089c9fa7","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/lemon.cs.elte.hu\/trac\/lemon\/"],"uses":[{"defaultflag":true,"description":"Enable the sci-libs\/coinor-clp and sci-libs\/coinor-cbc graph algorithms","isdefault":true,"packageid":61807,"use":"coin"},{"description":"Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally","isdefault":false,"use":"doc"},{"description":"Enable GNU Linear Programming Kit sci-mathematics\/glpk support","isdefault":false,"packageid":61807,"use":"glpk"},{"description":"Build static versions of dynamic libraries as well","isdefault":false,"use":"static-libs"},{"description":"Enable dependencies and\/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)","isdefault":false,"use":"test"}]}