{"bugs":[{"bugid":800644,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-libs\/lis-1.6.5 - \/...\/ld: fortran\/...\/libsaamg.a(lis_s_aggregate_mod.o): relocation R_X86_64_PC32 against symbol _data_structu"},{"bugid":814338,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-libs\/lis-1.6.5 - Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)\/REAL(8))."}],"categories":[{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a198e862478387fe37b4d232d51a3edb558cd3e0","committime":"2025-12-19T10:01:01","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Bug: https:\/\/bugs.gentoo.org\/473598\nBug: https:\/\/bugs.gentoo.org\/720224\nSigned-off-by: Fabian Groffen ","commitid":"2d25fad95cbaa525c8945d8e582c749d49524f49","committime":"2025-12-19T09:25:43","packageid":58725,"repoid":1,"summary":"*\/*: drop *-linux keywords"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"3a19cf4d338f5e3148b992d6aa29b31d532f3c4e","committime":"2024-04-01T05:48:55","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Dunno why upstream had to change. :(\n\nAlso dunno why PMS doesn't use libarchive. :(\n\nSigned-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"dfbb10378159b43af27a92937abba96e9efd3c1e","committime":"2024-04-01T00:25:12","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: add missing dep for switch to zip distfile"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"bd968c9141f6eb31b47f344848f839ef99a0e547","committime":"2024-03-31T23:49:01","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Current release is from 2016. Try to rebase onto a newer release.\n\nDoes not fix LTO, unfortunately.\n\nSigned-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"5011818526363f06dce12638a1c7c6b7c009147e","committime":"2024-03-31T19:11:45","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: add 2.1.3"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Signed-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"2abd42a82f10e749ac149b8ad81c8dbbb7bcd631","committime":"2024-03-31T19:02:36","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: update EAPI 6 -> 8"},{"authoremail":"eschwartz93@gmail.com","authorname":"Eli Schwartz","body":"Closes: https:\/\/bugs.gentoo.org\/927587\nSigned-off-by: Eli Schwartz \nSigned-off-by: Sam James ","commitid":"bc9c13edfc3e031b95be26c344be1b3231da560d","committime":"2024-03-31T19:01:29","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: mark as LTO-unsafe"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f5411e5e7897201c2cff9fa339c510e17c84815e","committime":"2022-05-14T21:47:53","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Signed-off-by: David Seifert ","commitid":"d256fef3b17af38873642d5178a2582204cca728","committime":"2022-05-14T21:30:25","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: [QA] tc-has-openmp → tc-check-openmp"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"ff90955737e37584dfddc83789859aa0350d24e4","committime":"2019-02-27T05:08:48","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"m.mairkeimberger@gmail.com","authorname":"Michael Mair-Keimberger","body":"Signed-off-by: Michael Mair-Keimberger \nSigned-off-by: Aaron Bauman ","commitid":"ffa9675370b036cde403a538840df9a75fafb4b0","committime":"2019-02-23T16:50:33","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: use HTTPS"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":58725,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"6d43f4e84e30cf4b24aecfd0ff4bcae337d0142b","committime":"2016-09-09T20:02:46","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: portage-2.3.0","commitid":"4eeb60fad01bf6833078fe630d160f39988dcf86","committime":"2016-09-09T07:36:05","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: Version bump to 1.6.5"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"34c8eb6de0ca3d4f229e028f0ae27171c6f1562f","committime":"2016-09-07T21:42:48","packageid":58725,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: portage-2.3.0","commitid":"ffba4f55843441d6c068021d1ac59219176eb15a","committime":"2016-09-07T21:23:18","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: Remove old"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"* EAPI=6\n\nPackage-Manager: portage-2.3.0","commitid":"1d8d995eef56b352407e0c6348193decaef224ca","committime":"2016-09-07T21:20:37","packageid":58725,"repoid":1,"summary":"sci-libs\/lis: Version bump to 1.6.2"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":58725,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":58725,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":58725,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":396,"description":"Virtual for Message Passing Interface (MPI) v2.0 implementation","ebuildids":[821141,821142],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"cluster@gentoo.org","maintainername":"Gentoo Cluster Project","name":"mpi","packageid":42101},{"block":false,"categoryid":396,"description":"Virtual for Fortran Compiler","ebuildids":[821141,821142],"firstseen":"2011-04-15T18:23:49.887464","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"fortran","packageid":57236}],"depending":[{"block":false,"categoryid":318,"description":"Gerris Flow Solver","ebuildids":[2059,2059],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"gerris","packageid":49938,"summary":"Gerris Flow Solver is a software program for the solution of the partial differential equations describing fluid flow."}],"ebuilds":[{"archs":["~amd64","~x86"],"ebuildid":821142,"firstseen":"2024-04-01T01:01:38.842462","license":"BSD","moddate":"2026-03-22T20:20:57","packageid":58725,"repoid":1,"slot":"0","uses":["cpu_flags_x86_fma3","cpu_flags_x86_fma4","cpu_flags_x86_sse2","doc","fortran","mpi","openmp","quad","saamg","static-libs"],"version":"2.1.3"},{"archs":["~amd64","~x86"],"ebuildid":821141,"firstseen":"2024-04-01T01:01:38.842462","license":"BSD","moddate":"2026-03-22T20:20:57","packageid":58725,"repoid":1,"slot":"0","uses":["cpu_flags_x86_fma3","cpu_flags_x86_fma4","cpu_flags_x86_sse2","doc","fortran","mpi","openmp","quad","saamg","static-libs"],"version":"1.6.5-r1"}],"masks":[],"package":{"categoryid":318,"description":"Library of Iterative Solvers for Linear Systems","firstseen":"2012-01-22T14:35:51.179677","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"lis","packageid":58725,"summary":"Lis, a Library of Iterative Solvers for linear systems, is a scalable parallel library for solving systems of linear equations and standard eigenvalue problems with real sparse matrices using iterative methods."},"rdependencies":[{"block":false,"categoryid":396,"description":"Virtual for Message Passing Interface (MPI) v2.0 implementation","ebuildids":[821141,821142],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"cluster@gentoo.org","maintainername":"Gentoo Cluster Project","name":"mpi","packageid":42101},{"block":false,"categoryid":396,"description":"Virtual for Fortran Compiler","ebuildids":[821141,821142],"firstseen":"2011-04-15T18:23:49.887464","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"fortran","packageid":57236}],"repos":[{"branch":"master","lastcommit":"52197549fd3431fa256b8edbafdcd3702dd0e134","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/www.ssisc.org\/lis\/index.en.html"],"uses":[{"description":"Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally","isdefault":false,"use":"doc"},{"description":"Add support for fortran","isdefault":false,"use":"fortran"},{"description":"Add MPI (Message Passing Interface) layer to the apps that support it","isdefault":false,"use":"mpi"},{"description":"Build support for the OpenMP (support parallel computing), requires >=sys-devel\/gcc-4.2 built with USE=\"openmp\"","isdefault":false,"use":"openmp"},{"description":"Enable quadruple precision operations","isdefault":false,"packageid":58725,"use":"quad"},{"description":"Build the Smoothed Aggregation Algebraic MultiGrid preconditioner","isdefault":false,"packageid":58725,"use":"saamg"},{"description":"Build static versions of dynamic libraries as well","isdefault":false,"use":"static-libs"},{"description":"Use the Fused Multiply Add 3 instruction set ([fma] in cpuinfo)","group":"cpu_flags_x86","isdefault":false,"use":"fma3"},{"description":"Use the Fused Multiply Add 4 instruction set","group":"cpu_flags_x86","isdefault":false,"use":"fma4"},{"description":"Use the SSE2 instruction set","group":"cpu_flags_x86","isdefault":false,"use":"sse2"}]}