{"bugs":[{"bugid":882443,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-mathematics\/jags: configure breakage with Clang 16 (uses outdated dev-lang\/R R.m4 macro)"},{"bugid":919721,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-mathematics\/jags-4.3.1 - [clang] DistTab.cc: error: use of undeclared identifier bind2nd"},{"bugid":967487,"firstseen":"2025-12-15T09:57:52.287517","severity":"normal","status":"CONFIRMED","summary":"sci-mathematics\/jags-4.3.1-r1 - [gcc-16] [meson] ! ==> Fatal error occurred, no output PDF file produced!"}],"categories":[{"categoryid":393,"name":"dev-libs","summary":"The dev-libs category contains various miscellaneous programming libraries."},{"categoryid":317,"name":"sci-mathematics","summary":"The sci-mathematics category contains mathematical software."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a198e862478387fe37b4d232d51a3edb558cd3e0","committime":"2025-12-19T10:01:01","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Bug: https:\/\/bugs.gentoo.org\/473598\nBug: https:\/\/bugs.gentoo.org\/720224\nSigned-off-by: Fabian Groffen ","commitid":"2d25fad95cbaa525c8945d8e582c749d49524f49","committime":"2025-12-19T09:25:43","packageid":56962,"repoid":1,"summary":"*\/*: drop *-linux keywords"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"6b5ca6d62755d0c52f92e498e57ce03ae88883ac","committime":"2024-11-15T22:33:23","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"dilfridge@gentoo.org","authorname":"Andreas K. Hüttel","body":"Signed-off-by: Andreas K. Hüttel ","commitid":"038a56ffacae243cec1221b153c4c72ee4503354","committime":"2024-11-15T22:22:48","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: drop 4.3.0"},{"authoremail":"dilfridge@gentoo.org","authorname":"Andreas K. Hüttel","body":"Closes: https:\/\/bugs.gentoo.org\/923377\nSigned-off-by: Andreas K. Hüttel ","commitid":"880698a32d241b6f1077fcef5211c1973d30cc88","committime":"2024-11-15T22:22:19","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: fix implicit exit() in configure"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"6aabcd1d616ab5e53bddd7bc756bb51ca734531e","committime":"2024-08-06T00:33:53","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"eschwartz@gentoo.org","authorname":"Eli Schwartz","body":"Signed-off-by: Eli Schwartz ","commitid":"1fcac3194b23e7a4f9b1ae6a99d373f36d35013f","committime":"2024-08-05T18:19:41","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: make sure elibtoolize is applied"},{"authoremail":"eschwartz@gentoo.org","authorname":"Eli Schwartz","body":"ltdl is internally used, and also included as a \"convenience copy\". If\nit's not available on the system then the code copy is used; if it is\navailable, we have a missing runtime dep.\n\nThe bundled copy also results in an LTO error.\n\nCloses: https:\/\/bugs.gentoo.org\/927674\nSigned-off-by: Eli Schwartz ","commitid":"44d876fa0ae1e1410845269e2819d415c59d47a8","committime":"2024-08-05T18:09:11","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: add missing automagic dependency"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"e817756739654c06c8a96e8fb68a3da1ba3af055","committime":"2024-04-30T18:48:55","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"watermanpaint@posteo.net","authorname":"Lucio Sauer","body":"bump copyright of touched ebuilds to 2024\n\nSigned-off-by: Lucio Sauer \nSigned-off-by: Michał Górny ","commitid":"794061a3298b5716db015defa7b3e2c583b73980","committime":"2024-04-12T10:47:52","packageid":56962,"repoid":1,"summary":"*\/*: inline mirror:\/\/sourceforge"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"5660ecc7a918ae350e7a56c5f244e0c7198964ab","committime":"2023-06-10T04:31:51","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"273dd62873c4c3da3677f92b3f3f14f515456ea1","committime":"2023-06-10T04:19:00","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Stabilize 4.3.1 amd64, #908183"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f2979793991144637956e4225ce4d0235900c1a2","committime":"2023-06-09T15:16:56","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"arthurzam@gentoo.org","authorname":"Arthur Zamarin","body":"Signed-off-by: Arthur Zamarin ","commitid":"30316aea31eb8dc9f0d304a306a7ce73c6613733","committime":"2023-06-03T14:54:51","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: destabilize for ~x86"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"920608bb4357b14a5ac84ac4a1b24e6a59ae9697","committime":"2022-11-22T08:01:56","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"89eab812522679c4aa55b7b47a79ef3b42ee1986","committime":"2022-11-22T07:56:58","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: add 4.3.1"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"6ced732a91320728c0ee9a750d08512d1edaa5c9","committime":"2022-11-22T07:08:47","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: use ver_cut in SRC_URI"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"403f6db082e868dd0261646c5c70466b6783d4d5","committime":"2022-08-30T22:16:57","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"asturm@gentoo.org","authorname":"Andreas Sturmlechner","body":"Closes: https:\/\/bugs.gentoo.org\/867538\nSigned-off-by: Andreas Sturmlechner ","commitid":"c36025e619509e943bbfc33e6489f0daaee4bd82","committime":"2022-08-30T21:33:08","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: drop 4.2.0, EAPI-6--"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"763860e47ad63caf5cec0b38439daf515286d47b","committime":"2022-08-30T18:48:53","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jsmolic@gentoo.org","authorname":"Jakov Smolić","body":"Signed-off-by: Jakov Smolić ","commitid":"d15334b377525226ef887317525caf35fd7f976a","committime":"2022-08-30T18:40:29","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Stabilize 4.3.0 x86, #867538"},{"authoremail":"jsmolic@gentoo.org","authorname":"Jakov Smolić","body":"Signed-off-by: Jakov Smolić ","commitid":"5393827e5dedf7400f53ceb0aba7c94b99891422","committime":"2022-08-30T18:39:02","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Stabilize 4.3.0 amd64, #867538"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"83f403bc5cddae7dff2912c4707e30bb0b6d0df5","committime":"2021-07-26T12:07:36","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"442492adcfcd958444088a716365ec1d145ca01d","committime":"2021-05-31T09:35:02","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"conikost@gentoo.org","authorname":"Conrad Kostecki","body":"Signed-off-by: Conrad Kostecki \nSigned-off-by: David Seifert ","commitid":"442f1adea122d81bce0ea1cb946c06797377e8dd","committime":"2021-05-31T09:19:30","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: drop deprecated ltprune eclass"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"824405877a9f8947595238a7dfec9a60b7e7c5e5","committime":"2021-04-16T11:35:32","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"sam@gentoo.org","authorname":"Sam James","body":"Signed-off-by: Sam James ","commitid":"50e950b6fe2168412518ebf6d0ea32feae8efc64","committime":"2021-04-16T08:14:42","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: eutils--"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"dcdec439559bd3dbf583382cda731faf9ae1e54e","committime":"2021-01-20T13:33:04","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jakov.smolic@sartura.hr","authorname":"Jakov Smolic","body":"Signed-off-by: Jakov Smolic \nSigned-off-by: David Seifert ","commitid":"f89071f77a47cc0d79fd142f297b409a1d68abed","committime":"2021-01-20T10:15:50","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Remove old"},{"authoremail":"xavier.fim@gmail.com","authorname":"xfim","body":"Also, updated to EAPI 7.\n\nCloses: https:\/\/bugs.gentoo.org\/711304\nCloses: https:\/\/github.com\/gentoo\/gentoo\/pull\/14823\nSigned-off-by: Andrew Ammerlaan \nSigned-off-by: Xavier Fernández i Marín \nPackage-Manager: Portage-2.3.89, Repoman-2.3.20","commitid":"c73befec8e2b1bfae6cbf34fcb7b3aca2f840ee0","committime":"2020-03-02T11:03:02","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Version bump for 4.3.0"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"87abf309c44acc27d55223debbcd96926a212e0a","committime":"2020-02-15T10:36:58","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-2.3.88, Repoman-2.3.20\nSigned-off-by: David Seifert ","commitid":"e999c179e9326e95b71c586c4deef18b6711562e","committime":"2020-02-15T10:02:43","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: [QA] inherit ltprune.eclass directly"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":56962,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"malfatti@neuro.ufrn.br","authorname":"T. Malfatti","commitid":"8457ba6f9fd6f0dbafcca1fb375788eeea02aae1","committime":"2017-01-26T18:44:34","packageid":56962,"repoid":1,"summary":"media-libs\/portaudio: Version bump"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"9cae84fbc9711e8571eb6103f2c9403bbfd40b44","committime":"2017-01-02T10:00:11","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.3.0\nRepoMan-Options: --include-arches=\"x86\"\nSigned-off-by: Agostino Sarubbo ","commitid":"680bb9f11cd2176a7eeb7738c5fed18c7afcd930","committime":"2017-01-02T09:45:49","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: x86 stable wrt bug #582930"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"40ab5ced99d04e092a93d19ee0c61ff3c67a2a7b","committime":"2016-09-26T12:45:26","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: portage-2.2.28\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo ","commitid":"e4cad9ca910e30479f87636cdf6a0a9c816755a1","committime":"2016-09-26T12:24:31","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: amd64 stable wrt bug #582930"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"35068fa5a99ea2358855cbc691d237708dd1f71f","committime":"2016-03-02T08:42:00","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"xavier.fim@gmail.com","authorname":"Xavier Fernández i Marín","commitid":"392357d2153784f4a9e9111be19c69f30d7ebbbb","committime":"2016-03-01T15:46:25","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: version bump to 4.2.0"},{"authoremail":"idella4@gentoo.org","authorname":"Ian Delaney","body":"Pull request: https:\/\/github.com\/gentoo\/gentoo\/pull\/705","commitid":"b6d9e1b28be0f0cfde49bedc39ddaca4a6afb1ab","committime":"2016-01-22T13:00:31","packageid":56962,"repoid":1,"summary":"Merge remote-tracking branch 'remotes\/sbraz\/urlwatch'"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"f9fe12bfd0eb3a6a574593f6155326980376f07d","committime":"2016-01-21T20:01:58","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: portage-2.2.27","commitid":"c1a9f9465003e2f54483034271d225fcc6cff5f3","committime":"2016-01-21T19:44:10","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: Remove 'autotools-utils.eclass', EAPI=6"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"6e87fd3534cb3ea61feafde0e0993e91c6e073f1","committime":"2015-11-28T18:01:56","packageid":56962,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"* xfim-master:\n sci-mathematics\/jags: QA: formating and usex() usage\n sci-mathematics\/jags Version bump (solves bug #562644).","commitid":"9a463842880639e245d75188913db8ca0f480cd1","committime":"2015-11-28T17:41:12","packageid":56962,"repoid":1,"summary":"Merge branch 'xfim-master'"},{"authoremail":"jlec@gentoo.org","authorname":"Justin Lecher","body":"Package-Manager: portage-2.2.25\nSigned-off-by: Justin Lecher ","commitid":"2d28c5500127fefc4e88fe4069dc25cd8f7d301b","committime":"2015-11-28T17:39:57","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: QA: formating and usex() usage"},{"authoremail":"xavier.fim@gmail.com","authorname":"Xavier Fernández i Marín","commitid":"b1376251f4604303695ee2c6949d825bceb82b71","committime":"2015-10-30T09:05:15","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags: version bump"},{"authoremail":"xavier.fim@gmail.com","authorname":"Xavier Fernández i Marín","commitid":"241a72969aecd4e8c67dadfede0b867f51b4df92","committime":"2015-10-30T09:05:15","packageid":56962,"repoid":1,"summary":"sci-mathematics\/jags Version bump (solves bug #562644)."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":56962,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":56962,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":56962,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":396,"description":"Virtual for FORTRAN 77 BLAS implementation","ebuildids":[834570],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"blas","packageid":43239},{"block":false,"categoryid":396,"description":"Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation","ebuildids":[834570],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"lapack","packageid":55481},{"block":false,"categoryid":393,"description":"A shared library tool for developers","ebuildids":[834570],"firstseen":"2014-11-03T14:39:06.100855","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"libltdl","packageid":62765}],"depending":[],"ebuilds":[{"archs":["amd64","~x86"],"ebuildid":834570,"firstseen":"2024-08-06T01:42:38.351001","license":"GPL-2","moddate":"2026-03-22T20:20:57","packageid":56962,"repoid":1,"slot":"0","uses":["doc"],"version":"4.3.1-r1"}],"masks":[],"package":{"categoryid":317,"description":"Just Another Gibbs Sampler for Bayesian MCMC simulation","firstseen":"2011-02-13T01:36:35.438374","maintainer":"sci-mathematics@gentoo.org","maintainername":"Gentoo Mathematics Project","name":"jags","packageid":56962,"summary":"JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS was written with three aims in mind: * To have an engine for the BUGS language that runs on Unix * To be extensible, allowing users to write their own functions, distributions and samplers. * To be a plaftorm for experimentation with ideas in Bayesian modelling"},"rdependencies":[{"block":false,"categoryid":396,"description":"Virtual for FORTRAN 77 BLAS implementation","ebuildids":[834570],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"blas","packageid":43239},{"block":false,"categoryid":396,"description":"Virtual for Linear Algebra Package FORTRAN 77 (LAPACK) implementation","ebuildids":[834570],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"lapack","packageid":55481},{"block":false,"categoryid":393,"description":"A shared library tool for developers","ebuildids":[834570],"firstseen":"2014-11-03T14:39:06.100855","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"libltdl","packageid":62765}],"repos":[{"branch":"master","lastcommit":"52197549fd3431fa256b8edbafdcd3702dd0e134","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/mcmc-jags.sourceforge.io\/"],"uses":[{"description":"Add extra documentation (API, Javadoc, etc). It is recommended to enable per package instead of globally","isdefault":false,"use":"doc"}]}