{"bugs":[{"bugid":836945,"firstseen":"2025-07-11T02:48:40.189262","severity":"normal","status":"CONFIRMED","summary":"sci-misc\/h5utils-1.13.1 - \/...\/ld: cannot find -loctinterp: No such file or directory"}],"categories":[{"categoryid":438,"name":"media-libs","summary":"The media-libs category contains media-related libraries."},{"categoryid":318,"name":"sci-libs","summary":"The sci-libs category contains various science-related libraries."},{"categoryid":424,"name":"sci-misc","summary":"The sci-misc category contains various miscellaneous science applications which do not fit any other sci-* category."},{"categoryid":396,"name":"virtual","summary":"The virtual category contains packages which satisfy virtual dependencies."}],"changelog":[{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a198e862478387fe37b4d232d51a3edb558cd3e0","committime":"2025-12-19T10:01:01","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"grobian@gentoo.org","authorname":"Fabian Groffen","body":"Bug: https:\/\/bugs.gentoo.org\/473598\nBug: https:\/\/bugs.gentoo.org\/720224\nSigned-off-by: Fabian Groffen ","commitid":"2d25fad95cbaa525c8945d8e582c749d49524f49","committime":"2025-12-19T09:25:43","packageid":49630,"repoid":1,"summary":"*\/*: drop *-linux keywords"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"00b4cc6bb3b864fbeaa6dca1da399c3716afed16","committime":"2025-11-04T09:50:46","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Done via:\n\n```\ngit grep -l virtual\/zlib$ | xargs sed -i -e 's@virtual\/zlib$@&:=@'\n```\n\nSigned-off-by: Michał Górny ","commitid":"6a3644bf2f9aace46ad9bbab2e4f3bccd747079e","committime":"2025-11-04T09:36:27","packageid":49630,"repoid":1,"summary":"*\/*: Add := to virtual\/zlib deps, part 1"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"5a1adb610b1d91ab6683cbe671e266f424224c16","committime":"2025-11-04T08:35:48","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"mgorny@gentoo.org","authorname":"Michał Górny","body":"Update done using:\n\n```\ngit grep -l sys-libs\/zlib dev-* | xargs sed -i -e s@sys-libs\/zlib@virtual\/zlib@g\ngit diff --name-only | xargs copybump\ngit diff --name-only | xargs grep -l PYTHON_COMPAT | xargs gpy-impl -@dead\npkgcheck scan --commits -c SourcingCheck,VisibilityCheck --exit error\n```\n\nSigned-off-by: Michał Górny ","commitid":"f1351833569f8b22abc3dc9e74abeed7e8641096","committime":"2025-11-04T08:17:06","packageid":49630,"repoid":1,"summary":"sci-*\/*: update for virtual\/zlib"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"f2979793991144637956e4225ce4d0235900c1a2","committime":"2023-06-09T15:16:56","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"arthurzam@gentoo.org","authorname":"Arthur Zamarin","body":"Signed-off-by: Arthur Zamarin ","commitid":"ca1a284212c65e2d2c79a01915447da0577158af","committime":"2023-06-03T14:55:53","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: destabilize for ~x86"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a8a96bfa3e1415495c0430c8c9cdde8c1e4872d4","committime":"2021-03-26T15:20:29","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"ago@gentoo.org","authorname":"Agostino Sarubbo","body":"Package-Manager: Portage-3.0.13, Repoman-3.0.2\nRepoMan-Options: --include-arches=\"amd64\"\nSigned-off-by: Agostino Sarubbo ","commitid":"8165934526dcb51fbf24b74e38f8bfef6de9a060","committime":"2021-03-26T15:13:23","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: amd64 stable wrt bug #770409"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"569cb3174ba06ee04e6f501ba4e0fc13bdbbb7a6","committime":"2021-03-13T20:36:04","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: Portage-3.0.17, Repoman-3.0.2\nSigned-off-by: David Seifert ","commitid":"b28edec9611a9a68e94c8c1d4586a1123564c0ae","committime":"2021-03-13T20:18:48","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: Remove old 1.12.1-r2"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"c82e78a84dfb6aad2944d688213e1df50be5e045","committime":"2021-03-07T16:05:50","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"whissi@gentoo.org","authorname":"Thomas Deutschmann","body":"Package-Manager: Portage-3.0.16, Repoman-3.0.2\nSigned-off-by: Thomas Deutschmann ","commitid":"6a258fd1fccebcdf66e11801ab044ef951ec3028","committime":"2021-03-07T15:53:41","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: x86 stable (bug #770409)"},{"authoremail":"repomirrorci@gentoo.org","authorname":"Repository mirror & CI","commitid":"a7a5a50b592d5934501e9bd6bd50e7e2c3b0c2b2","committime":"2021-01-24T14:32:48","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"jakov.smolic@sartura.hr","authorname":"Jakov Smolic","body":"Signed-off-by: Jakov Smolic \nSigned-off-by: David Seifert ","commitid":"2afadf2e1c5f6ce1c7abc35fa6833f35d89bc1ff","committime":"2021-01-24T13:48:25","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: Bump to 1.13.1"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"25093d6359f778b8d1052f66ba9e26fc29ded21a","committime":"2017-02-28T20:35:29","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"Signed-off-by: Robin H. Johnson ","commitid":"61b861acd7b49083dab687e133f30f3331cb7480","committime":"2017-02-28T19:47:27","packageid":49630,"repoid":1,"summary":"Drop $Id$ per council decision in bug #611234."},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"e5d43d82f580d5cde9db124f78af363ce7588e04","committime":"2016-05-14T23:42:39","packageid":49630,"repoid":1,"summary":"Merge updates from master"},{"authoremail":"soap@gentoo.org","authorname":"David Seifert","body":"Package-Manager: portage-2.2.28","commitid":"305dd5cf8dfd76eaf028e2fc99a571e2fb836c2e","committime":"2016-05-14T23:17:52","packageid":49630,"repoid":1,"summary":"sci-misc\/h5utils: Fix QA MissingSlotDep"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"945f0d2a26da4f944fd06ad6a874f69d37ce1e06","committime":"2015-08-09T09:26:46","packageid":49630,"repoid":1,"summary":"2015-08-09 09:26:21 UTC"},{"authoremail":"robbat2@gentoo.org","authorname":"Robin H. Johnson","body":"This commit represents a new era for Gentoo:\nStoring the gentoo-x86 tree in Git, as converted from CVS.\n\nThis commit is the start of the NEW history.\nAny historical data is intended to be grafted onto this point.\n\nCreation process:\n1. Take final CVS checkout snapshot\n2. Remove ALL ChangeLog* files\n3. Transform all Manifests to thin\n4. Remove empty Manifests\n5. Convert all stale $Header$\/$Id$ CVS keywords to non-expanded Git $Id$\n5.1. Do not touch files with -kb\/-ko keyword flags.\n\nSigned-off-by: Robin H. Johnson \nX-Thanks: Alec Warner - did the GSoC 2006 migration tests\nX-Thanks: Robin H. Johnson - infra guy, herding this project\nX-Thanks: Nguyen Thai Ngoc Duy - Former Gentoo developer, wrote Git features for the migration\nX-Thanks: Brian Harring - wrote much python to improve cvs2svn\nX-Thanks: Rich Freeman - validation scripts\nX-Thanks: Patrick Lauer - Gentoo dev, running new 2014 work in migration\nX-Thanks: Michał Górny - scripts, QA, nagging\nX-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed","commitid":"56bd759df1d0c750a065b8c845e93d5dfa6b549d","committime":"2015-08-08T20:49:04","packageid":49630,"repoid":1,"summary":"proj\/gentoo: Initial commit"},{"authoremail":"repo-qa-checks@gentoo.org","authorname":"Repository QA checks","commitid":"a637bd65b7fef8e2be4e7fc6e9097479372e0e2e","committime":"2015-06-19T16:38:33","packageid":49630,"repoid":1,"summary":"2015-06-19 16:35:30 UTC"}],"dependencies":[{"block":false,"categoryid":318,"description":"General purpose library and file format for storing scientific data","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"xarthisius@gentoo.org","maintainername":"Kacper Kowalik","name":"hdf5","packageid":42259,"summary":"HDF5 is a file format and library for storing scientific data. HDF5 was designed and implemented to address the deficiencies of HDF4.x. It has a more powerful and flexible data model, supports files larger than 2 GB, and supports parallel I\/O."},{"block":false,"categoryid":438,"description":"Portable Network Graphics library","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"libpng","packageid":49028},{"block":false,"categoryid":318,"description":"General purpose library and format for storing scientific data","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"hdf","packageid":52587,"summary":"The Hierarchical Data Format is a general purpose library and file format for storing scientific data. HDF can store two primary objects: datasets and groups. A dataset is essentially a multidimensional array of data elements, and a group is a structure for organizing objects in an HDF file. Using these two basic objects, one can create and store almost any kind of scientific data structure, such as images, arrays of vectors, and structured and unstructured grids. You can also mix and match them in HDF files according to your needs."},{"block":false,"categoryid":396,"description":"Virtual to select between libjpeg-turbo and IJG jpeg for source-based packages","ebuildids":[698157],"firstseen":"2010-07-24T14:36:23.013789","maintainer":"graphics@gentoo.org","maintainername":"Gentoo Graphics Project","name":"jpeg","packageid":56088},{"block":false,"categoryid":396,"description":"Virtual for libz.so providers","ebuildids":[698157],"firstseen":"2025-11-04T07:31:41.418357","name":"zlib","packageid":78605}],"depending":[],"ebuilds":[{"archs":["amd64","~ppc","~x86"],"ebuildid":698157,"firstseen":"2021-01-24T14:41:23.076001","license":"GPL-2","moddate":"2026-03-22T20:20:57","packageid":49630,"repoid":1,"slot":"0","uses":["hdf","octave"],"version":"1.13.1"}],"masks":[],"package":{"categoryid":424,"description":"Utilities for visualization and conversion of HDF5 files","firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"h5utils","packageid":49630,"summary":"h5utils is a set of utilities for visualization and conversion of scientific data in the free, portable HDF5 format. Besides providing a simple tool for batch visualization as PNG images, h5utils also includes programs to convert HDF5 datasets into the formats required by other free visualization software (e.g. plain text, Vis5d, and VTK)."},"rdependencies":[{"block":false,"categoryid":318,"description":"General purpose library and file format for storing scientific data","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"xarthisius@gentoo.org","maintainername":"Kacper Kowalik","name":"hdf5","packageid":42259,"summary":"HDF5 is a file format and library for storing scientific data. HDF5 was designed and implemented to address the deficiencies of HDF4.x. It has a more powerful and flexible data model, supports files larger than 2 GB, and supports parallel I\/O."},{"block":false,"categoryid":438,"description":"Portable Network Graphics library","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"base-system@gentoo.org","maintainername":"Gentoo Base System","name":"libpng","packageid":49028},{"block":false,"categoryid":318,"description":"General purpose library and format for storing scientific data","ebuildids":[698157],"firstseen":"2010-05-04T00:54:45.661860","maintainer":"sci@gentoo.org","maintainername":"Gentoo Science Project","name":"hdf","packageid":52587,"summary":"The Hierarchical Data Format is a general purpose library and file format for storing scientific data. HDF can store two primary objects: datasets and groups. A dataset is essentially a multidimensional array of data elements, and a group is a structure for organizing objects in an HDF file. Using these two basic objects, one can create and store almost any kind of scientific data structure, such as images, arrays of vectors, and structured and unstructured grids. You can also mix and match them in HDF files according to your needs."},{"block":false,"categoryid":396,"description":"Virtual to select between libjpeg-turbo and IJG jpeg for source-based packages","ebuildids":[698157],"firstseen":"2010-07-24T14:36:23.013789","maintainer":"graphics@gentoo.org","maintainername":"Gentoo Graphics Project","name":"jpeg","packageid":56088},{"block":false,"categoryid":396,"description":"Virtual for libz.so providers","ebuildids":[698157],"firstseen":"2025-11-04T07:31:41.418357","name":"zlib","packageid":78605}],"repos":[{"branch":"master","lastcommit":"1f58741385367db432e79500a838ced67b2a773d","name":"gentoo","path":"\/usr\/portage","repoid":1,"upstream":"origin"}],"tracked":false,"urls":["https:\/\/github.com\/NanoComp\/h5utils"],"uses":[{"description":"Build hdf to hdf5 (and vice-versa) converter","isdefault":false,"packageid":49630,"use":"hdf"},{"description":"Build Octave plugins","isdefault":false,"packageid":49630,"use":"octave"}]}